医学分子生物学论文-翻译版

医学分子生物学论文-翻译版
医学分子生物学论文-翻译版

前列腺癌细胞的单细胞转录组分析

作者:克里斯托弗罗杰布莱斯等

关键词:前列腺癌;单细胞;肿瘤细胞转录组;

一.背景

我们了解正在循环的肿瘤细胞(CTC)和已转移的肿瘤细胞(DTC)的能力一直因为只能检测和离析到少量(通常是< 10)的这类细胞而制约。为了确定是否一个可取的商用技术可以提供前列腺癌细胞(PCa) 的一个单细胞转录组剖面,我们无性繁殖地选择和培养了一些细胞周期同步的C4-2B PCa细胞。十套1,5 10个细胞通过使用一个有倒置显微镜的显微操纵器在直接观察下被分离。此外,获得两组包含10个从2个pca细胞已转移的患者骨髓中离析出来的离散DTC。使用WT-Ovation? One-Direct Amplification系统使RNA放大。然后让被放大的原料在44 k全人类基因表达微阵列里杂化。一个高严密性的阈值,一个平均Alexa荧光标记强度大于300用于基因探测,为了使用实时PCR(RT定量酵素聚合反应技术)来选择基因,还要验证相对表达式标准。二.方法

1.离散的 PCa细胞的培养和离析

为了获得一个同步的PCa的细胞群进行分析,我们在混合有10%FBS的 RPMI 1640培养基(生命科学技术股份有限公司)中无性繁殖地选择C4-2B细胞和培养一些细胞。为了分离这些细胞,在24小时之前用30毫克/毫升的Aphidicolin(σ)进行处理。在混合有10%FBS的 RPMI 1640培养基里,细胞被胰蛋白酶化和重新悬浮。十个重复的单个,集中5细胞和集中的10细胞(共30个样本)通过使用玻璃微量吸液管被分离使用,然后在被放大前在零下80度下最少保存2周。这种细胞转移到裂解缓冲液的现象已经通过直接可视化得到验证。2.pca病人骨髓中离散DTC的提取

所有获取和使用的原料符合在华盛顿大学达成的IRB批准协议。从晚期Pca患者的骨髓样本中分离出DTC。10毫升的骨髓从髂嵴中抽出至30毫升包含10毫升6%柠檬酸钠的注射器。从患者获得的样本中,两边的抽出物被制得和混合为总共20毫升的骨髓。使用局部麻醉,从臀部的髂嵴中取出骨髓样本。样品的处理在1 - 2小时内开始,5个小时内完成。

3.细胞浓缩

细胞的浓缩和离析表现得如前所述。简单地说,骨髓抽出物被放置在一个15毫升体积的聚蔗糖-甲泛影纳制剂1.077 g / ml(精确的化学制品,韦斯特伯里,纽约)里。如果离心分离,随后就会产生含有DTC的单核细胞层。使用MACS系统来选择免疫磁珠。 Anti-CD45和anti-CD61抗体用于阴性选择和靶定巨核细胞,白细胞和血小板。然后阳性选择的对象是涂有抵抗人类上皮细胞抗原抗体的免疫磁珠。

4.识别DTC

5 PCa细胞中整体RNA的放大

6.实时PCR(RT定量酵素聚合反应技术)

7.Agilent碎片上放大原料的标记和杂交

8.基因表达分析

三.结果

一个可取的商用技术可以提供前列腺癌细胞(PCa) 的一个单细胞转录组剖面。正如预期的那样,从一份单细胞的样品比从浓缩样品中检测到更少的放大的基因,然而这个方法可以用来可靠地获得一个来自于DTC(从PCA患者的骨髓中获得)的转录组剖面。

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