Gene cloning, expression and characterization of a cold-adapted lipase from
分子生物学名词解释

分子生物学名词解释分子生物学考试重点一、名词解释1、分子生物学(molecular biology):分子生物学是研究核酸、蛋白质等所有生物大分子的形态、结构特征及其重要性、规律性和相互关系的科学。
2、C值(C value):一种生物单倍体基因组DNA的总量。
在真核生物中,C值一般是随生物进化而增加的,高等生物的C值一般大于低等生物。
3、DNA多态性(DNA polymorphism):DNA多态性是指DNA序列中发生变异而导致的个体间核苷酸序列的差异。
4、端粒(telomere):端粒是真核生物线性基因组DNA末端的一种特殊结构,它是一段DNA序列和蛋白质形成的复合体。
5、半保留复制(semi-conservative replication):DNA 在复制过程中碱基间的氢键首先断裂,双螺旋解旋并被分开,每条链分别作为模板合成新链,产生互补的两条链。
这样形成的两个DNA分子与原来DNA 分子的碱基顺序完全一样。
一次,每个子代分子的一条链来自亲代DNA,另一条链则是新合成的,所以这种复制方式被称为DNA 的半保留复制。
6、复制子(replicon):复制子是指生物体的复制单位。
一个复制子只含一个复制起点。
7、半不连续复制(semi-discontinuous replication):DNA 复制过程中,一条链的合成是连续的,另一条链的合成是中断的、不连续的,因此称为半不连续复制。
8、前导链(leading strand):与复制叉移动的方向一致,通过连续的5W聚合合成的新的DNA链。
9、后随链(lagging strand):与复制叉移动的方向相反,通过不连续的5\T聚合合成的新的DNA链。
10、AP位点(AP site):所有细胞中都带有不同类型、能识别受损核酸位点的糖昔水解酶,它能特异性切除受损核昔酸上N-B糖昔键,在DNA链上形成去嘌吟或去嘧啶位点,统称为AP位点。
11、cDNA(complementary DNA):在体外以mRNA 为模板,利用反转录酶和DNA聚合酶合成的一段双链DNA。
衣原体rnasehⅱ编码基因的克隆与表达及酶的纯化与性质鉴定

河南大学硕士学位论文衣原体RNase HⅡ编码基因的克隆与表达及酶的纯化与性质鉴定姓名:***申请学位级别:硕士专业:遗传学指导教师:李锁平;王子成20050601衣原体RN越cHll编码基因的克隆与表达及酶的纯化与性质签定中英文对照2致谢衷心感谢我的导师李锁平教授。
三年以来,在学习、生活和工作上,李老师给了我莫大的关怀和教导。
从李老师的身上我目睹了一代典范导师的风采。
李老师默驮无闻、踏踏实实、兢兢业业的工作作风更是对我产生了深远的影响。
在毕业之际谨向李老师致以最崇高的敬意l感谢尚富德老师在这三年里对我的帮助。
从尚老师身上我体会到了做事先做人的深刻含义,我将努力做人。
感谢宋纯鹏院长、王恒兵副院长、苗琛副院长、王天仕副院长、海富生副书记和丁圣彦教授三年来在学习和生活中给我的指导和帮助l衷心感谢本实验室的王子成博士、李玉阁老师、高安礼老师、黄世全老师对实验的悉心指导和热情帮助。
衷心感谢李淑娟老师、李忠爱老师在学习和生活上给予了无私的关怀和无微不至的帮助。
感谢生命科学学院里的张骁博士、郭曙光老师、谷艳芳老师、张霖老师、杨生玉老师、王刚博士、张彤老师、安国勇老师、苗雨晨老师、白玲老师、周云老师、王棚涛老师、王鹏程老师、金志荣老师、李黎老师、燕静安老师、徐仪广老师、壬磊老师等也给予了莫大的关心和帮助。
办公室的张莉老师为实验仪器的购买、维护付出了辛勤的劳动,办公室的史振莹老师为论文的排版和打印付出了辛勤的工作,办公室的薛敬忠老师为实验室的日常维护做出默默的贡献,在此一并表示感谢l感谢上海交通大学生命科学技术学院生物化学和分子生物学实验室的导师刘建华教授给予我的无私帮助。
感谢上海交大实验室的老师余晶和同学刘喜朋、王坚、葛宜和、刘俊、侯敬丽、梁如冰、于爱蓉、张毅等。
在上海实验的一年时间里我受益匪浅,内心里时时被感动着。
从他们身上我懂得了做科研需要有无私的胸怀。
尤其感谢同实验室的张大乐、代小华、袁王俊、董美芳、苏亚蕊、高红云、李永、刘萍、曹进国、贺洁、韩洁、李瑾、刘春潮、何艳霞、张成婉同学以及王丽娟、赵伟、薛瑞丽、夏金蝉、薄惠、范文超、杨俊*、张国增等同学的热情帮助和关心。
基因克隆,表达及功能研究

更多生物医学资源下载:
Lac Z
本资源由药智网收集整理: A plasmid vector for gene expression
Expression vectors: allowing the exogenous DNA to be inserted, stored and expressed. 1. Promoter and terminator for RNA transcription are required. 2. Intact ORF and ribosomal binding sites (RBS) are required for translation. 3. Include:(1) bacterial expression vectors, (2) yeast expression vectors, (3) mammalian expression vector
本资源由药智网收集整理:
Recombinant plasmid (contain insert)
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back
Multiple cloning sites 本资源由药智网收集整理:
更多生物医学资源下载:
本资源由药智网收集整理:
本资源由药智网收集整理:
Cosmid vectors
1. Utilizing the properties of the phage l cos sites in a plasmid vector. 2. A combination of the plasmid vector and the COS site which allows the target DNA to be inserted into the l head. 3. The insert can be 37-52 kb
生物工程专业英语作业

03
Identify different genetic traits that are inherited in Mendelian inheritance patterns Focus on the impact of genetic traits on human health and issues
Cell Division and Growth: Describe the process of cell division, including mitosis and cytokinesis Explain how cells grow and multiply
Fundamentals of Cell Biology
Identify the different types of cells in the human body and explain their functions Describe the organization of cells into issues and the types of issues found in the human body
Rapid development period
After the mid-20th century, with the development of disciplines such as molecular biology and cell biology, biotechnology entered a period of rapid development.
要点三
Fundamentals of Biochemistry
03
Biotechnology experimental technology
基因的克隆与表达课件

----TAC -----TTG GAC CTT AAG GAT CCA---
DNA序列
AAT CGG AAG AAT TCA GAC CTA GGT TTA GCC TTC TTA AGT CTG GCT CCA
基因的克隆与表达课件
位相载体----含有3种读码框的系列载体
基因的克隆与表达课件
优点: • 表达效率高 • 产物稳定 • 易鉴定:融合蛋白分子量大,电泳可
➢基因克隆(gene cloning) ➢基因表达(gene expression)
-原核基因表达 -真核基因表达
基因的克隆与表达课件
基因克 隆 Gene Cloning
基因的克隆与表达课件
➢概述 ➢克隆载体 ➢受体细胞 ➢体外重组的策略 ➢基因克隆工作流程
基因的克隆与表达课件
一、概述
• 确定了遗传信息的携带者,即基因的盆 子载体是DNA而不是蛋白质
基因的克隆与表达课件
(二)体外重组 连接体系的建立: • 温度:粘末端连接:12-18℃
平末端连接:室温(低于30℃) • DNA量:载体分子数/目的基因分子数
=1:1-3 • 酶量:平端连接时需加大酶量
基因的克隆与表达课件
(三)转化—Cacl2法、电击法
(四)重组子的筛选及鉴定
1、筛选:平板法(抗生素、蓝白斑)
基因的克隆与表达课件
二.原核生物基因结构和表达特点
基因的克隆与表达课件
• 原核生物染色体DNA是裸露的环形 DNA,其转录和翻译是偶联的连续 进行。
• 原核生物形成多顺反子mRNA: mRNA在合成过程中和多个核糖体 结合,翻译形成多条肽链。
基因的克隆与表达课件
3、一般不含内含子(intron),没有转 录及翻译后加工系统
变形链球菌UA159葡萄糖基转移酶B催化活性区的基因克隆及表达

变形链球菌UA159葡萄糖基转移酶B催化活性区的基因克隆及表达玉佳男1,田晶1,李宝丽1,张永霞2,刘睿1(1.华中农业大学食品科学技术学院,环境食品学教育部重点实验室,湖北武汉 430070)(2.普健生物(武汉)科技有限公司,湖北武汉 430070)摘要:为获得具有良好生物活性的可溶性葡萄糖基转移酶催化活性区(GTFB/CA T),根据NCBI上已发表的Streptococcus mutans UA159(血清型c)GTFB的DNA测序结果,按照GTFB/CA T两端的序列设计引物,利用PCR克隆技术钓取S. mutans UA159(血清型c)的GTFB/CA T基因,连入表达载体pET-28b(+)中构成pET-28b(+)-GTFB/CA T重组体,将重组载体转入大肠杆菌BL21(E.coil BL21)宿主菌中进行诱导表达,最佳诱导条件为37 ℃或30℃、4 h、诱导剂IPTG的浓度为1 mmol/L,产物经Ni2+-NA T树脂亲和层析纯化,得到了不可溶的GTFB/CA T包涵体,包涵体通过变性-复性最终得到可溶性蛋白,产物经SDS-PAGE分析表明,在44 ku处有一明显条带,与预期蛋白分子量一致,蛋白纯度约为80%,采用Somogyi法测得GTFB/CA T蛋白的比酶活为1.66IU/mg。
研究表明:成功克隆GTFB/CA T基因并通过在E.coil BL21原核体系中表达得到有生物活性的可溶性蛋白,为后续研究GTF的抗结剂及预防龋齿的效果及机理奠定了基础。
关键词:变形链球菌UA159(血清型c);葡萄糖基转移酶催化活性区;基因表达;克隆;比酶活文章篇号:1673-9078(2015)5-71-75 DOI: 10.13982/j.mfst.1673-9078.2015.5.012 Gene Cloning and Expression of the Catalytic Region of GlycosyltransferaseB from Streptococcus mutans UA159YU Jia-nan1, TIAN Jing1, LI Bao-li1, ZHANG Y ong-xia2, LIU Rui1(1.Key Laboratory of Environment Correlative Dietology, College of Food Science and Technology, Huazhong AgriculturalUniversity, Wuhan 430070, China) (2.PuJian biological technology co., LTD., Wuhan 430070, China) Abstract: Water-soluble, catalytic region of glycosyltransferase B (GTFB/CA T) with good bioactivity, was obtained from Streptococcus mutans UA159 (Ingbritt c). The primers were designed based on the conservative sequences of GTFB gene in S. mutans UA159 (Ingbritt c), as listed in the National Center for Biotechnology Information database and the sequences at the ends of GTFB/CAT. The GTFB/CAT gene was amplified by polymerase chain reaction from S. mutans UA159 (Ingbritt c) and then cloned into vector pET-28b(+) to construct the recombinant pET-28b(+)-GTFB/CA T, which was then transformed into Escherichia coli BL21. Optimal induction conditions were as follows: temperature at 37 ℃or 30 ℃; time for 4 h; 1 mmol/L of IPTG for induction. The product was purified by Ni2+-NA T resin-affinity chromatography and insoluble inclusion body GTFB/CA T was obtained. Subsequent denaturing and refolding produced the water-soluble protein. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis revealed a clear band at 44 ku, which is consistent with the expected molecular weight, and the purity of protein was approximately 80%. The specific activity of the protein was found to be 1.66 IU/mg by the Somogyi method. The results indicated that water-soluble proteins with biological activity were obtained through the expression of cloned GTFB/CAT gene in Escherichia coli BL21. This will lay a basis on further study of GTF antagonists and their effect as well as mechanism of action in prevention of dental caries.Key words: Streptococcus mutans UA159 (Ingbritt c); catalytic region of glycosyltransferases B; gene expression; cloning; specific activity收稿日期:2014-08-29基金项目:国家自然科学基金(31271939)作者简介:玉佳男(1989-),女,硕士研究生,研究方向为天然产物化学与分子生物学通讯作者:刘睿(1969-),男,博士,副教授,研究方向:天然产物化学龋齿是影响我国居民口腔健康的重要问题之一,变形链球菌(Streptococcus mutans,S.mutans)是诱发龋齿的主要致病菌之一,通过粘附在牙齿表面并代谢口腔中的碳水化合物产酸,导致牙齿脱矿,最终形成龋洞。
cdna合成反应体系英文
cdna合成反应体系英文cDNA Synthesis Reaction System.The cDNA synthesis reaction system is a crucial step in molecular biology, enabling the conversion of messenger RNA (mRNA) into cDNA, which can then be used in various downstream applications such as gene cloning, expression analysis, and quantitative PCR. This process is typically carried out in a laboratory setting and requires meticulous attention to detail to ensure accurate and reproducible results.Components of the cDNA Synthesis Reaction System.1. mRNA Template: The mRNA is the starting material for cDNA synthesis. It carries the genetic information encoded in the DNA of an organism and is responsible for protein synthesis. The mRNA is isolated from cells or tissues using appropriate extraction methods.2. Reverse Transcriptase Enzyme: Reverse transcriptase is a key enzyme in the cDNA synthesis reaction. It catalyzes the conversion of mRNA into cDNA by adding deoxyribonucleotides to the 3' end of the mRNA template in a 5' to 3' direction. There are various types of reverse transcriptases available, including those with enhanced specificity and activity.3. Deoxyribonucleotide Triphosphates (dNTPs): These are the building blocks for cDNA synthesis. Each dNTP contains a deoxyribose sugar, a phosphate group, and a nitrogenous base (adenine, thymine, cytosine, or guanine). The dNTPs are added to the growing cDNA chain during the synthesis reaction.4. Random Hexamer or Oligo(dT) Primers: These primers serve as starting points for cDNA synthesis. Random hexamers are short oligonucleotides that bind nonspecifically to the mRNA template, while oligo(dT) primers bind specifically to the 3' poly(A) tail of eukaryotic mRNAs.5. Reaction Buffer: The reaction buffer provides an optimal environment for the cDNA synthesis reaction by maintaining the appropriate pH and ionic strength. It also contains components that stabilize the reaction and protect the enzymes from inactivation.6. Other Additives: Depending on the specific protocol and reverse transcriptase enzyme used, additional additives may be included in the cDNA synthesis reaction, such as dithiothreitol (DTT) to reduce disulfide bonds, RNase inhibitors to prevent mRNA degradation, and magnesium ions to activate the reverse transcriptase enzyme.Steps in the cDNA Synthesis Reaction.1. mRNA Isolation: mRNA is isolated from cells or tissues using appropriate extraction methods such as TRIzol or phenol-chloroform extraction. The isolated mRNA is then purified and concentrated for use in the cDNA synthesis reaction.2. mRNA and Primer Annealing: The mRNA template isincubated with either random hexamer or oligo(dT) primers under denaturing conditions to allow for the annealing of the primers to the mRNA. This step ensures that the primers are in close proximity to the mRNA template for efficient cDNA synthesis.3. Reverse Transcriptase Reaction: The reverse transcriptase enzyme, dNTPs, reaction buffer, and any additional additives are combined with the mRNA-primer complex. The reaction is then incubated at an appropriate temperature for a specified duration to allow for cDNA synthesis. During this step, the reverse transcriptase enzyme catalyzes the addition of dNTPs to the 3' end of the mRNA template in a 5' to 3' direction, resulting in the formation of a cDNA strand complementary to the mRNA.4. Termination and cDNA Purification: After the completion of the reverse transcriptase reaction, the cDNA is typically terminated by heat inactivation of the enzyme. The cDNA can then be purified using appropriate methods such as ethanol precipitation or column purification to remove any residual reagents and mRNA template.Applications of cDNA Synthesis.cDNA synthesis has a wide range of applications in molecular biology research. Some common uses include:1. Gene Cloning: cDNA can be cloned into vectors and transformed into bacterial cells for the production of recombinant proteins or for genetic analysis.2. Expression Analysis: cDNA can be used inquantitative PCR (qPCR) or microarray analysis to measure gene expression levels in different tissues or underdifferent conditions.3. Functional Genomics: cDNA libraries can be constructed from different tissues or cells to study gene expression patterns and identify novel genes or transcripts.4. RNA Sequencing (RNA-Seq): cDNA generated from mRNA samples is sequenced using high-throughput sequencing technologies to provide comprehensive transcriptomeanalysis.Conclusion.The cDNA synthesis reaction system is a crucial step in molecular biology, enabling the conversion of mRNA into cDNA for downstream applications. It requires meticulous attention to detail, including the careful selection of reagents and adherence to specific reaction conditions. By following standard protocols and using high-quality reagents, researchers can generate accurate and reproducible cDNA for use in a wide range of molecular biology experiments.。
氨基酸词汇中英对照
氨基酸词汇中英对照氨基酸是构成蛋白质的基本单位,赋予蛋白质特定的分子结构形态,使他的分子具有生化活性。
小编为大家整理了氨基酸词汇中英对照,希望对你有帮助哦!酪氨酸 L-Tyrosine苯丙氨酸 L-Phenylalanine脯氨酸 L-Proline絲氨酸 L-serine蘇氨酸 L-Threonine纈氨酸 L-Valine精氨酸 L-Arginine精氨酸鹽酸鹽 L-Arginine Monohydrochloride精氨酸醋酸鹽 L-Arginine Acetate胱氨酸 L-Cystine組氨酸 L-Histidine組氨酸醋酸鹽 L-Histidine Acetate組氨酸鹽酸鹽 L-Histidine hydrochloride亮氨酸 L-Leucine賴氨酸 L-LysineL-Leucine L-亮氨酸(Sigma)L-Lysine HCl L-赖氨酸盐酸盐L-Lysine HCl L-赖氨酸盐酸盐(Sigma)L-Lysine L-赖氨酸L-Methionine L-甲硫氨酸L-Methionine L-甲硫氨酸(Sigma)L-Ornithine HCl L-鸟氨酸盐酸盐L-Phenylalanine L-苯丙氨酸L-Phenylalanine L-苯丙氨酸(Sigma)L-Proline L-脯氨酸L-Serine L-丝氨酸L-Threonine L-苏氨酸L-Threonine L-苏氨酸(Sigma)L-Tryptophan L-色氨酸L-Tyrosine L-酪氨酸L-Tyrosine L-酪氨酸 (Sigma)L-Valine L-缬氨酸N-Acetyl-L-Cysteteine N-乙酰- L-半胱氨酸Poly-D-Lysine L-多聚-D-赖氨酸Poly-D-Lysine L-多聚-D-赖氨酸Poly-D-Lysine L-多聚-D-赖氨酸DL-Methionine DL-甲硫氨酸Glycine 甘氨酸L-Alanine L-丙氨酸(Sigma)L-Arginine HCl L-精氨酸盐酸盐L-Arginine HCl L-精氨酸盐酸盐(Sigma)L-Arginine L-精氨酸L-Arginine L-精氨酸(Sigma)L-Asparagine L-天门冬酰胺L-Asparagine L-天门冬酰胺(Sigma)L-Aspartic acid L-天门冬氨酸L-Aspartic acid L-天门冬氨酸(Sigma)L-Cysteine HCl L-半胱氨酸盐酸盐L-Cysteine HCl L-半胱氨酸盐酸盐(Sigma) L-Cysteine L-半胱氨酸L-Cysteine L-半胱氨酸(Sigma)L-Cystine L-胱氨酸L-Cystine L-胱氨酸(Sigma)L-Glutamic acid L-谷氨酸L-Glutamic Sodium L-谷氨酸钠L-Glutamine L-谷氨酰胺L-Glutamine L-谷氨酰胺(Sigma)L-Glutathione(Oxidized Form) L-谷胱甘肽(氧化型)L-Glutathione(Reduced Form) L-谷胱甘肽(还原型)(Amresco) L-Glutathione(Reduced Form) L-谷胱甘肽(还原型)(日本)L-Histidine L-组氨酸L-Histidine L-组氨酸(Sigma)L-Hydroxyproline L-羟脯氨酸L-Isoleucine L-异亮氨酸L-Isoleucine L-异亮氨酸(Sigma)L-Leucine L-亮氨酸HGS MOLECULAR STRUCTURE MODELS HGS生物结构模型HGS Polyhedron Molecular Model HGS多面体分子模型Student Crystal Structure H Set H套学生晶体结构Researcher Inorganic Chemistry D Set D套研究学者用无机化学模型Student Crystal Mini Set 学生晶体微型模型DEscriptION OF ZEOLITE MODELS 硅酸盐模型描述HGS Biochemistry Molecular Model HGS生物化学分子模型Biochemistry Molecular Model 生物化学分子模型Protein Nucleic Acid Set manual 蛋白质核酸成套模型手册Protein Set manual 蛋白质模型手册Amino acid backbones and Side chains 氨基酸支架和侧链Glutamic acid side chain 谷氨酸侧链Tyrosine side chain 酪氨酸侧链Asparagine side chain 天冬酰胺酸侧链Glutamine side chain 谷氨酸盐侧链Cysteine side chain 巯基丙氨酸侧链Threonine side chain 苏氨酸侧链Serine side chain 丝氨酸侧链Histidine 组氨酸Lysine side chain 赖氨酸侧链Arginine 精氨酸Tryptphan side chainGlycine 氨基乙酸Alanine 丙胺酸Phenylalanine 苯基丙氨酸Prorine side chainMethionine side chain 甲硫氨酸侧链Valine side chain 缬氨酸侧链Leucine side chain 白氨酸侧链Isoleucine side chain 异亮氨酸侧链Polynucleotide chains and Base pairs 多聚核苷酸链和双基座Poiynucleotide chain ribosePoiynucleotide chain deoxiriboseAdenine-Thymine pair A-T 腺嘌呤—胸腺嘧啶A-T结对Guanine-Cytosine Pair G-C 腺苷——胞核嘧啶G-C结对Adenosine 腺苷三磷酸盐图表 triphosphates chartnucleoside [ 5nju:kliEsaid] 核苷Okazaki fragment [ 7Euka:5za:ki 5frAgmEnt] 冈崎片段oncogene [ 5oNkEudVi:n] 癌基因,原癌基因one carbon unit [ wQn 5ka:bEn 5ju:nit] 一碳单位operator [ 5opE(reitE] 操纵基因operon [ 5opEron] 操纵子orotic acid [ o:5rotik 5Asid] 乳清酸ossification [ 7osifi5keiFEn] 成骨作用oxaloacetic acid [ 7oksElEuE5si:tik 5Asid] 草酰乙酸oxidases [ 5oksideisiz] 氧化酶类oxidative phosphorylation [ 7oksi5deitiv 7fosfEuri5leiFEn] 氧化磷酸化oxidoreductase [ 7oksidEri5dQkteis] 氧化还原酶palindrome [ 5pAlindrEum] 回文结构pancreatic lipase [ 7pAnkri5Atik 5lipeis(5lai)] 胰脂肪酶pantothenic acid [ 7pAntE5Wenik 5Asid] 遍多酸pentose [ 5pentEus] 戊糖pentose phosphate pathway [ 5pentEus 5fosfeit 5pAWwei] 磷酸戊糖途径pepsin [ 5pepsin] 胃蛋白酶pepsinogen [ pep5sinEdVEn] 胃蛋白酶原peptide [ 5peptaid] 肽peptide bond [ 5peptaid bond] 肽键peptidyl site [ 5peptidil sait] 肽基位或P位peroxidase [ pE5roksideis] 过氧化物酶phenylalanine [ 7fi:nil5AlEni:n] 苯丙氨酸phosphatidic acid [ 7fosfE5tidik 5Asid] 磷脂酸phosphogluconate [ 7fosfEu5glu:kEneit] 磷酸葡萄糖酸phospholipase [ 7fosfEu5li(5lai)peis] 磷脂酶plasmid [ 5plAzmid] 质粒polycistron [ 7poli5sistrEn] 多作用子polypeptide [ 7poli5peptaid] 多肽porphyrin [ 5po:fErin] 卟啉precipitation [ 7prisipi5teiFEn] 沉淀preproalbumin [ 7pri:prE5Albjumin] 前清蛋白原primary structure [ 5praimEri 5strQktFE] 一级结构primase [ 5praimeis] 引发酶primer [ 5praimE] 引物glucogenic amino acid [ 7glu:kEu5dVenik 5AminEu 5Asid] 生糖氨基酸?glucokinase [ 7glu:kEu5kaineis] 葡萄糖激酶?gluconeogenesis [ 7glu:kEu7ni:Eu5dVenisis] 糖(原)异生作用?glutamic acid [ glu:5tAmik] 谷氨酸glutaminase [ 5glu:tEmineis] 谷氨酰胺酶?glutamine [ 5glu:tEmi:n] 谷氨酰胺?glutathione [ 7glu:tE5WaiEun] 谷胱甘肽?glycerol [ 5glisErol] 甘油?glycine [ 5glaisi:n] 甘氨酸?glycogen [ 5glaikEudV(E)n] 糖原?glycogen phosphorylase [ fos5forileis] 糖原磷酸化酶?glycogen synthase [ 5sinWeis(z)] 糖原合成酶?glycolysis [ glai5kolisis] 糖酵解?guanosine [ 5gwa:nEsi:n] 鸟苷?helicase [ 5helikeis] 解链酶(解旋酶)?heme [ hi:m] 血红素?heteroduplex [ 7hetErEu5dju:pleks] 杂化双链hexokinase [ 7heksEu5kaineis] 己糖激酶?histamine [ 5histEmin (5histEmi:n)] 组胺?histidine [ 5histidi:n] 组氨酸?housekeeping gene [ 5hauski:piN] 管家基因?hybridization [ 7haibridai5zeiFEn] 杂交?hydrogen bond [ 5haidrEdV(E)n bond] 氢键?hydrolase [ 5haidrEleis] 水解酶类?hydroperoxidases [ 7haidrEupE5roksideis] 氢过氧化酶类?hydrophobic bond (hydrophobic interaction) [ 7haidrEu5fEubik bond] 疏水键?hydroxyapatite [ hai7droksi5ApEtait] 羟磷灰石?hydroxymethylglutaryl CoA cleavage enzyme [ 5kli:vidV 5enzaim] HMG CoA裂解酶hydroxymethylglutaryl CoA synthetase [ 5sinWiteis(z)] HMG CoA合酶Hydroxyproline [ hai7droksi5prEuli:n] 羟脯氨酸acceptor site [ Ek5septE(r) sait] 受位acetone [ 5AsitEun] 丙酮activator [ 5AktiveitE(r)] 激活蛋白,激活剂,活化物adenine (A) [ 5AdEni:n] 腺嘌呤adenosine [ E5denEsin] 腺苷aerobic dehydrogenase [ eE5rEubik di:5haidrEdVEneis] 需氧脱氢酶alanine [ 5AlEni:n] 丙氨酸albumin [ 5Albjumin] 白蛋白,清蛋白allopurinol [ 7AlEu5pjuErinol] 别嘌呤醇allosteric effect [ 7AlE5sterik i5fekt] 别构(位)效应allosteric enzyme [ 7AlE5sterik 5enzaim] 变构酶,别位酶allosteric regulation [ 7AlE5sterik 7regju5leiF(E)n] 别构调节amine [ 5eimi:n] 胺aminoacyl site [ 7Ami(E7mi:)nEu5Asil sait] A位,氨酰基位anticodon [ 7Anti5kEudon] 反密码子arginine [ 5a:dVinain] 精氨酸ascorbic acid [ E5sko:bik 5Asid] 抗坏血酸 (维生素C)asparagine [ E5spArEdVi:n] 天冬酰胺aspartic acid [ Es5pa:tik 5Esid] 天冬氨酸asymmetric transcription [ 7Asi5metrik trAn5skripF(E)n] 不对称转录attenuator [ E5tenjueitE(r)] 衰减子base [ beis] 碱基base pairing [ beis 5peEriN] 碱基配对bile pigment [ bail 5pigmEnt] 胆色素biotin [ 5baiEtin] 生物素biotransformation [ 7baiEu7trAnsfo:5meiFEn] 生物转化calcitriol [ 5kAlsitriEul] 1,25二羟胆骨化醇(钙三醇)calcium dependent protein kinase [ di5pend(E)nt 5prEuti:n 5kai(ki)neiz] Ca依赖性蛋白激酶,蛋白激酶C(C激酶)Calmodulincarbohydrate [ 7ka:bEu5haidreit] 糖?carnitine [ 5ka:niti:n] 肉毒碱?catalase [ 5(AtEleis] 触酶,过氧化氢酶?cephalin [ 5sefElin] 脑磷脂?de novo synthesis [ dE(di:) 5nEuvE 5sinWisis] 从头合成?degradation [ 7degrE5deiFEn] 降解?denaturation [ di:7neitFE5reiFEn] 变性?deoxycholic acid [ di:7oksi5kolik 5Asid] 脱氧胆酸?deoxyribonucleotide [ di:5oksi7raibEu5nju:kliEtaid] 脱氧核糖核苷酸 ?dialysis [ dai5Alisis] 透析dihydroxyacetone phosphate [ 7daihai7droksi5AsEtEun 5fosfeit] 磷酸二羟丙酮 ?disulfide bond [ dai5sQlfaid bond] 二硫键?DNA polymerase [ 5polimEreis(z)] DNA聚合酶?domain [ dE5mein] 域,结构域,功能区?donor site [ 5dEunE(r) sait] 给位?double helix [ 5dQb(E)l 5hi:liks] 双螺旋?effector [ i5fektE(r)] 效应器,效应物?elongation [ 7i:loN5geiF(E)n] 延长?endopeptidase [ 7endEu5peptideis] 内肽酶enhancer [ in5ha:nsE (in5hAnsE)] 增强子?enolphosphopyruvate [ i:nol7fosfEupai5ru:veit] 磷酸烯醇式丙酮酸 ?enzyme [ 5enzaim] 酶?essential amino acid [ i5senF(E)l E5mi:nEu 5Asid] 必需氨基酸?essential fatty acid [ i5senF(E)l 5Asid] 必需脂肪酸?exon [ 5ekson] 外显子?exopeptidase [ 7eksEu5peptideis] 外肽酶?fat [ fAt] 脂肪?feedback inhibition [ inhi5biF(E)n] 反馈抑制作用?feritin [ 5ferEtin] 铁蛋白?ferrochelatase [ 7ferEu5ki:lEteis] 亚铁螯合酶?folic acid [ 5fEulik 5Asid] 叶酸?free fatty acid [ fri: 5fAti] 游离脂肪酸?free radicals [ fri: 5rAdik(E)l] 自由基?fructose diphosphatase [ 5frQktEuz dai5fos5feiteis] 果糖二磷酸酶gene cloning [ klEun] 基因克隆?gene expression [ ik5spreF(E)n] 基因表达?gene library [ 5laibreri] 基因文库?gene transfer [ trAns5f*:(r)] 基因导入,转基因?genetic code [ kEud] 遗传密码?genetic engineering [ 7endVi5niEriN] 基因工程?genetic recombination [ 7ri:kombi5neiFEn] 基因重组?genome [ 5dVi:nEum] 染色体基因,基因组globin [ 5glEubin] 珠蛋白?hypocalcemia [ 7haipEukAl5si:miE] 低钙血症induction [ in5dQkF(E)n] 诱导?initiator codon [ i5niFieitE(r) 5kEudon] 起动信号,起始密码子 ?intermediary metabolism [ 7intE5mi:diEri mi5tAbEliz(E)m] 中间代谢?ionic bond [ ai5onik bond] 离子键isocitrate dehydrogenase [ 7aisEu5sitreit di:5haidrEdVEneis] 异柠檬酸脱氢酶isoleucine [ 7aisEu5lju:si:n] 异亮氨酸?isomerase [ ai5somEreis] 异构酶类?isozyme [ 5aisEuzaim] 同工酶?jaundice [ 5dVo:ndis] 黄疸ketogenic amino acid [ 7ki:tEu5dVenik 5Asid] 生酮氨基酸?key enzyme [ 5enzaim] 关键酶?kinase [ 5kai(ki)neiz] 激酶?lactate [ lAk5teit] 乳酸盐?lecithin [ 5lesiWin] 卵磷脂?leucine [ 5lju:si:n] 亮氨酸ligase [ 5li(5lai)geis] 连接酶linoleate [ li5nEulieit] 亚油酸linolenate [ 7linEu5li:neit] 亚麻酸lipoic acid [ li5poik 5Asid] 硫辛酸?lipoid [ 5li(lai)poid] 类脂lipoprotein [ 7li(lai)pEu5prEuti:n] 脂蛋白?lithocholic acid [ 7liWEu5kolik 5Asid] 石胆酸?lyases [ 5laieis] 裂合酶类?malate [ 5meileit] 苹果酸malate aspartate shuttle [ 5meileit Es5pa:teit FQtl] 苹果酸天冬氨酸穿梭metabolic regulation [ 7metE5bolik 7regju5leiFEn] 代谢调节mitogen activated protein kinase [ 5mitEdVEn 5Aktiveitid 5prEuti:n 5kaineis] 分裂原活化蛋白激酶mixed function oxidase [ 5mikst 5fQNFEn 5oksideis] 混合功能氧化酶molecular cloning [ mE5lekjulE 5klEuniN] 分子克隆molecular disease [ mE5lekjulE di5zi:z] 分子病monooxygenase [ 7monE5oksidVEneis] 单加氧酶monooxygenase system [ 7monE5oksidVEneis 5sistEm] 单加氧酶体系nicotinamide [ 7nikE5tinEmaid] 烟酰胺,尼克酰胺nitrogen balance [ 5naitrEdV(E)n 5bAlEns] 氮平衡pyruvate carboxylase [ 5pi(ai)ru:veit ka:5boksileis] 丙酮酸羧化酶pyruvate dehydrogenase complex [ 5pi(ai)ru:veit di:5haidrEdVEnais 5kompleks] 丙酮酸脱氢酶复合体pyruvate kinase [ 5p(a)iru:veit(pai) 5kai(i)neiz] 丙酮酸激酶quaternary structure [ 5kwAtEnEri 5strQktFE] 四级结构recombinant DNA [ ri5kombinEnt] 重组DNAgenetic engineering [ 7endVi5niEriN] 基因工程?regulatory gene [ 5regju:leitEri dVi:n] 调节基因renaturation [ ri:7nei(A)tFE5reiFEn] 复性repair [ ri5pZE(r)] 修复replication [ 7ripli5keiFEn] 复制repression [ ri5preFEn] 阻遏residue [ 5rezidju:] 残基respiratory chain [ ri5spairEtEri tFein] 呼吸链restriction endonuclease [ ri5strikFEn 7endEu5nju:klieis] 限制性内切核酸酶retinol [ 5retinol] 视黄醇(维生素A)reverse transcriptase [ ri5v*:s trAns5kripteis] 逆转录酶reverse transcription [ ri5v*:s trAns5kripFEn] 逆转录作用salting out [ 5so:ltiN aut] 盐析salvage pathway [ 5sAlvidV 5pa:Wwei] 补救(重新利用)途径screening [ 5skri:niN] 筛选secondary structure [ 5sekEndEri 5strQktFE(r)] 二级结构semiconservative replication [ 7semikEn5sE:vEtiv 7ripli5keiFEn] 半保留复制sense strand [ sens strAnd] 有意义链sequence [ 5si:kwEns] 序列serine [ 5seri:n] 丝氨酸signal recognition particle [ 5signEl 7rekEg5niFEn 5pa:tikEl] 信号肽识别颗粒silencer [ 5sailEnsE(r)] 抑制子simple protein [ 5simp(E)l 5prEuti:n] 单纯蛋白质specificity [ 7spesi5fisEti] 特异性splicing [ 5splaisiN] 剪接作用squalene [ 5skwAli:n] 鲨烯stage specificity [ steidV 7spesi5fisiti] 阶段特异性stercobilinogen [ 7stE:kEubi5linEdVEn] 粪胆素原stress [ stres] 应激structural gene [ 5strQktFErEl dVi:n] 结构基因substrate [ 5sQbstreit] 作用物substrate level phosphorylation [ 5sQbstreit 5lev(E)l 7fosfEri5leiFEn] 作用物(底物)水平磷酸化subunit [ sQb5ju:nit] 亚单位,亚基succinate dehydrogenase [ 5sQksineit di5haidrEdVEneis] 琥珀酸脱氢酶supersecondary structure [ 7sju:pE5sekEndEri 5strQktFE(r)] 超二级结构Taurine [ 5tori(:)n] 牛磺酸telomerase [ 5telEmEreiz] 端粒酶telomere [ 5telEmiE] 端区(端粒)template strand [ 5templeit strAnd] 模板链termination [ 7tE:mi5neiF(E)n] 终止terminator [ 5tE:mineitE] 终止子terminator codon [ 5tE:mineitE 5kEudEn] 终止信号tertiary structure [ 5tE:FEri 5strQktFE(r)] 三级结构thiamine [ 5WaiEmi(:)n] 硫胺素(维生素B1)threonine [ 5WriEni:n] 苏氨酸thymidine [ 5Waimidi:n] 胸苷,胸腺嘧啶核苷thymine (T) [ 5Waimi:n] 胸腺嘧啶tocopherol [ tE5kofErol] 生育酚proalbumin [ prE5Albjumin] 清蛋白原processing [ prEu5sesiN] 加工proenzyme [ pro5enzaim] 酶原proline [ 5prEuli:n] 脯氨酸promoter [ pro5mEutE] 启动基因 (启动子),催化剂prosthetic group [ pros5Wetik gru:p] 辅基protease [ 5prEutieis] 蛋白酶pyridoxal [ 7piri5doksEl] 吡哆醛pyridoxamine [ 7piri5doksEmi:n] 吡哆胺賴氨酸鹽酸鹽 L-Lysine hydrochloride賴氨酸醋酸鹽 L-Lysine Acetate半胱氨酸鹽酸鹽一水物L-Cysteine hydrochloride monohydrate半胱氨酸鹽酸鹽無水物 L-Cysteine hydrochloride anhydrous半胱氨酸堿 L-Cysteine Base乙酰半胱氨酸 N-Acety-L-Cysteine羧甲基半胱氨酸 S-Carboxymethyl-L-Cysteine。
转基因食物相关术语英语
转基因食物相关术语英语Title: Key Terminology Relating to Genetically Modified Foods.Genetically modified foods, often referred to as GM foods, have been a subject of debate and controversy for many years. As the field of biotechnology continues to advance, it's important to have a clear understanding ofthe terminology and concepts involved. This article aims to provide a comprehensive overview of key terms related to genetically modified foods.1. Genetically Modified Organism (GMO): This refers to any organism, including plants, animals, and microorganisms, that has been genetically altered using biotechnology. The modifications can include the addition of new genes, the alteration of existing genes, or the removal of genes.2. Genetic Engineering: This is the process of manipulating the genetic material of an organism to producedesired traits or characteristics. It involves the transfer of genetic material between different species, or even between different kingdoms of life.3. Transgene: This refers to a gene that has been inserted into the genome of an organism through genetic engineering. The transgene can come from the same species as the recipient organism, or it can come from a different species or even a different kingdom of life.4. Promoter: This is a region of DNA that controls the expression of a gene. In genetically modified foods, promoters are often used to ensure that the transgene is expressed in the desired tissue or at the desired time.5. Vector: This is a vehicle used to deliver the transgene into the recipient organism. Vectors can be plasmids (small circles of DNA), viruses, or other types of genetic material.6. Genetic Modification Technique: There are several techniques used to genetically modify organisms, includinggene cloning, gene splicing, and gene editing. Each technique has its own advantages and disadvantages, and the choice of technique depends on the desired outcome.7. Herbicide Resistance: One of the most common reasons for genetically modifying crops is to make them resistantto herbicides. This allows farmers to use herbicides to control weeds without harming the crop. However, this hasled to concerns about the potential for herbicide-resistant weeds to develop.8. Insect Resistance: Another common reason for genetically modifying crops is to make them resistant to insects that can damage them. This is achieved by inserting genes from other species that produce insecticidal proteins. However, this has led to concerns about the potential for these genes to transfer to other organisms and affect ecosystems.9. Nutritional Enhancement: Genetic modification can also be used to enhance the nutritional value of foods. For example, genes can be inserted to increase the levels ofvitamins or essential amino acids in crops. However, this raises questions about the safety and ethics of modifying the nutritional profile of foods.10. Labeling: There is debate about whether genetically modified foods should be labeled as such. Some consumers prefer to know if the food they are eating has been genetically modified, while others do not consider it important. Labeling policies vary from country to country.In conclusion, genetically modified foods are a complex subject that involves many technical terms and concepts.It's important for consumers and policymakers to have a clear understanding of these terms to make informed decisions about the use and regulation of genetically modified foods. As biotechnology continues to advance, it's likely that we will see more genetically modified foods on the market, and it's essential that we have a solid foundation of knowledge to guide us through this evolving field.。
基因英语词汇翻译
基因英语词汇翻译Aactivation domain 活化结构域adapters 连接物adenine 腺嘌呤adenosine 腺ADP (adenosine diphosphate) 腺二磷酸affinity column 亲和柱AFLP (amplified fragment length polymorphisms) 增值性断片长度多态现象agrobacterium 农杆菌属alanine 丙氨酸allele 等位基因amber mutation 琥珀型突变AMP (adenosine monophosphate) 腺一磷酸ampicillin 氨?青霉素anchor primer 锚状引物annealing 退火annealing temperature 退火温度anticodon 反密码子AP-PCR (arbitrarily primed PCR) 任意引物聚合?链反应arbitrary primer 任意引物ATP (adenosine triphosphate) 腺三磷酸autosome 常染色体腺苷脱氨酶缺乏症 adenosine deaminasedeficiency (ADA) 腺病毒 adenovirusAlagille综合征 Alagille syndrome等位基因 allele氨基酸 amino acids动物模型 animal model抗体 antibody凋亡 apoptosis路-巴综合征ataxia-telangiectasia常染色体显性autosomal dominant常染色体 autosomeBbaculovirus 杆状病毒base pair ..基对base sequence ..基顺序beta-galactosidase ..-半乳糖? beta-glucuronidase ..-葡糖醛酸糖? bioluminescence 生物发光bioremediation 生物降解biotechnology 生物技术blotting 印迹法blue-white selection 蓝白斑筛选细菌人工染色体 bacterial artificial chromosome (BAC)碱基对 base pair先天缺陷birth defect骨髓移植bone marrow transplantation blunt end 平(整末)端Ccatalyst 催化剂cDNA library 反向转录DNA库centromere 着丝体centrosome 中心体chemiluminescence 化学发光chiasma 交叉chromomere 染色粒chromoplast 有色体chromosomal aberration 染色体畸变chromosomal duplication 染色体复制chromosomal fibre 染色体牵丝chromosome 染色体chromosome complement 染色体组chromosome map 染色体图chromosome mutation 染色体突变clone 克隆cloning 无性繁殖系化codon 密码子codon degeneracy 密码简并codon usage 密码子选择cohesive end 黏性末端complementary DNA (cDNA) 反向转录DNA complementary gene 互补基因consensus sequence 共有序列construct 组成cosmids 黏性质粒crossing over 互换cyclic AMP (cAMP) 环腺酸cytosine 胞嘧啶癌 cancer后选基因 candidate gene癌 carcinomacDNA文库 cDNA library 细胞cell染色体 chromosome克隆 cloning密码 codon天生的 congenital重叠群 contig囊性纤维化 cystic fibrosis 细胞遗传图 cytogenetic mapDdark band 暗带deamination 脱氨基作用decarboxylation 脱羧基作用degenerate code 简并密码degenerate PCR 退化性聚合?链反应dehydrogenase 脱氢?denaturation 变性deoxyribonucleoside diphospahte 脱氧核糖核一磷酸deoxyribonucleoside monophospahte 脱氧核糖核二磷酸deoxyribonucleoside triphospahte 脱氧核糖核三磷酸deoxyribose 去(脱)氧核糖dicarboxylic acid 二羧酸digoxigenin 洋地黄毒diploid 二倍体DNA (deoxyribonucleic acid) 去(脱)氧核糖核酸DNA binding domain DNA结合性结构域DNA fingerprinting DNA指纹图谱DNA helicase DNA解螺旋?DNA kinase DNA激?DNA ligase DNA连接?DNA polymer DNA聚合物DNA polymerase DNA聚合?double helix 双螺旋double-strand 双链缺失 deletion脱氧核糖核酸 deoxyribonucleic acid (DNA) 糖尿病 diabetes mellitus二倍体 diploidDNA复制 DNA replicationDNA测序 DNA sequencing显性的 dominant双螺旋 double helix复制 duplicationEelectroporation 电穿孔endonuclease 内切核酸? enhancer 增强子enterokinase 肠激? episome 游离基因ethidium bromide 溴乙锭eukaryotic 真核生物的euploid 整倍体exonuclease 外切核酸?expressed-sequence tags 表达的序列标记片段extron 外含子电泳electrophoresis 酶enzyme外显子exonFF factor F因子FAD (flavine adenine dinucleotide) 黄素腺嘌呤二(双)核酸feedback control 反馈控制feedback inhibition 反馈抑制feedback mechanism 反馈机制first filial (F1) generation 第一子代FISH (fluoresence in situ hybridization) 荧光原位杂交forward mutation 正向突变F-pilus F纤毛functional complementation 功能性互补作用fusion protein 融合蛋白家族性地中海热familial Mediterraneanfever 荧光原位杂交fluorescence in situhybridization (FISH) 脆性X染色体综合征Fragile X syndromeGgel electrophoresis 凝胶电泳gene 基因gene cloning 基因克隆gene conversion 基因转变gene duplication 基因复制gene flow 基因流动gene gun 基因枪gene interaction 基因相互作用gene locus 基因位点gene mutation 基因突变gene regulation 基因调节gene segregation 基因分离gene therapy 基因治疗geneome 基因组/ 染色体组genetic map 基因图genetic modified foods (GM foods) 基因食物genetics 遗传学genetypic ratio 基因型比/ 基因型比值genome 基因组/ 染色体组genomic library 基因组文库genotype 基因型giant chromosome 巨染色体globulin 球蛋白glucose-6-phosphate dehydrogenase 6-磷酸葡萄糖脱氢?GP (glycerate phosphate) 磷酸甘油酸脂GTP (guanine triphosphate) 鸟三磷酸guanine 鸟嘌呤基因扩增gene amplification基因表达gene expression基因图谱gene mapping基因库gene pool基因治疗gene therapy基因转移gene transfer遗传密码genetic code (A TGC)遗传咨询genetic counseling遗传图genetic map遗传标记genetic marker遗传病筛查genetic screening基因组genome基因型genotype种系germ lineHhaploid 单倍体haploid generation 单倍世代heredity 遗传heterochromatin 异染色质Hfr strain 高频重组菌株holoenzyme 全?homologous 同源的housekeeping gene 家务基因hybridization 杂交单倍体haploid造血干细胞hematopoietic stem cell 血友病hemophilia 杂合子heterozygous高度保守序列highly conserved sequence Hirschsprung病Hirschsprung's disease纯合子homozygous人工染色体human artificial chromosome (HAC)人类基因组计划Human Genome Project human immunodeficiency virus (HIV)/ 人类免疫缺陷病毒acquired immunodeficiency syndrome (AIDS) 获得性免疫缺陷综合征huntington舞蹈病Huntington's diseaseIimmunoglobulin 免疫球蛋白in vitro 在体外/ 在试管内in vivio 在体内independent assortment 独立分配induced mutation 诱发性突变induction 诱导initiation codon 起始密码子inosine 次黄insert 插入片段insertional inactivation 插入失活interference 干扰intergenic 基因间的interphase 间期intragenic 基因内的intron 内含子inversion 倒位isocaudarner 同尾酸isoschizomer 同切点?Kkanamycin 卡那毒素klenow fragment 克列诺夫片段Llac operon 乳糖操纵子ligase 连接? ligation 连接作用light band 明带linker 连接体liposome 脂质体locus 位点Mmap distance 图距离map unit 图距单位mature transcript 成熟转录物metaphase 中期methylase 甲基化? methylation 甲基化作用microarray 微列microinjection 微注射missense mutation 错差突变molecular genetics 分子遗传学monoploid 单倍体monosome 单染色体messenger RNA (mRNA) 信使RNA multiple alleles 复(多)等位基因mutagen 诱变剂mutagenesis 诱变mutant 突变体mutant gene 突变基因mutant strain 突变株mutation 突变mutation rate 突变率muton 突变子畸形malformation描图mapping标记marker黑色素瘤melanoma孟德尔Mendel, Johann (Gregor)孟德尔遗传Mendelian inheritance信使RNA messenger RNA (mRNA)[分裂]中期metaphase微阵技术microarray technology线立体DNA mitochondrial DNA单体性monosomy小鼠模型mouse model多发性内分泌瘤病multiple endocrine neoplasia, type 1 (MEN1)NNAD (nicotinamide adenine dinucleotide) 烟醯胺腺嘌呤二核酸NADP (nicotinamide adenine dinucleotide phosphate) 烟醯胺腺嘌呤二核酸磷酸nicking activity 切割活性nonsense codon 无意义密码子nonsense mutation 无意义突变Northern blot Northern印迹法nuclear DNA 核DNAnuclear gene 核基因nuclease 核酸?nucleic acid 核酸nucleoside 核nucleoside triphosphate 核三磷酸nucleotidase 核酸?nucleotide 核酸nucleotide sequence 核酸序列神经纤维瘤病neurofibromatosis尼曼-皮克病Niemann-Pick disease, type C (NPC)RNA印记Northern blot核苷酸nucleotide神经核nucleusOoligonucleotide 寡核酸one gene one polypeptide hypothesis 一个基因学说operon 操纵子oxidative decarboxylation 氧化脱羧作用oxidative phosphorylation 氧化磷酸化作用寡核苷酸oligo癌基因oncogenePpeptide ? peptide bond ?键phagemids 噬菌粒phosphorylation 磷酸化作用physical map 物理图谱plasmid 质粒point mutation 点突变poly(A) tail poly(A)尾polymerase 聚合?polyploid 多倍体positional cloning 位置性无性繁殖系化primary transcript 初级转录物primer 引物probe 探针prokaryotic 原核的promoter 启动子protease 蛋白?purine 嘌呤pyrimidine 嘧啶Parkinson病Parkinson's disease血系/谱系pedigree表型phenotype物理图谱physical map多指畸形/多趾畸形polydactyly聚合酶链反应polymerase chain reaction (PCR)多态性polymorphism定位克隆positional cloning原发性免疫缺陷primary immunodeficiency 原核pronucleus前列腺癌prostate cancerRrandom segregation 随机分离RAPD (rapid amplified polymorphic DNA) 快速扩增多态DNAreading frame 阅读码框recessive gene 隐性基因recombinant 重组体recombinant DNA technology 重组DNA技术recombination 重组regulator (gene) 调控基因replica 复制物/ 印模replica plating 复制平皿(板)培养法replication 复制replication origin 复制起点reporter gene 报道基因repression 阻遏repressor 阻遏物repressor gene 阻遏基因resistance strain 抗药性菌株restriction 限制作用restriction enzyme 限制性内切? restriction mapping 限制性内切?图谱retrovirus 反转录病毒reverse transcription 反转录作用RFLP (restricted fragment length polymorphisms) 限制性断片长度多态现象ribonucleotide 核糖核酸ribose 核糖ribosomal RNA (rRNA) 核糖体RNA ribosome 核糖体RNA (ribonucleic acid) 核糖核酸RNA polymerase I RNA聚合?IRNA polymerase II RNA聚合?IIRNA polymerase III RNA聚合?IIIR-plasmid R质粒/ 抗药性质粒隐性recessive逆转录病毒retrovirus核糖核酸ribonucleic acid (RNA)核糖体ribosomeSsecond filial (F2) generation 第二子代self-ligation 自我连接作用shuttle vectors 穿梭载体sigma factor ..因子single nucleotide polymorphism 单核酸多态性single-stranded DNA 单链DNAsister chromatid 姊妹染色单体sister chromosome 姊妹染色体site-directed mutagenesis 定点诱变somatic cell 体细胞Southern blot Southern印迹法splice 拼接star activity 星号活性stationary phase 静止生长期sticky end 黏性末端stop codon 终止密码子structural gene 结构基因supernatant 上层清液supressor 抑制基因序列标记位点sequence-tagged site (STS) 联合免疫缺陷severe combined immunodeficiency (SCID)性染色体sex chromosome伴性的sex-linked体细胞somatic cellsDNA印记Southern blot光谱核型spectral karyotype (SKY)替代substitution自杀基因suicide gene综合征syndromeTtelophase 末期template 模板terminator 终止子tetracycline 四环素thymine 胸腺嘧啶tissue culture 组织培养transcription 转录作用transfer RNA (tRNA) 转移RNA transformation 转化作用transgene 转基因translation 翻译/ 平移transmembrane 跨膜triplet 三联体triplet code 三联体密码triploid 三倍体技术转让technology transfer转基因的transgenic易位translocation三体型trisomy肿瘤抑制基因tumor suppressor geneVvector 载体WWestern blot Western印迹法Wolfram综合征Wolfram syndromeY 酵母人工染色体yeast artificial chromosome (YAC)。
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ORIGINAL PAPERGene cloning,expression and characterization of a cold-adapted lipase from a psychrophilic deep-sea bacterium Psychrobacter sp.C18Ruipeng Chen •Lizhong Guo •Hongyue DangReceived:30January 2010/Accepted:4June 2010/Published online:23June 2010ÓSpringer Science+Business Media B.V.2010Abstract A psychrophilic bacterium Psychrobacter sp.C18previously isolated from the Southern Okinawa Trough deep-sea sediments showed extracellular lipolytic activity towards tributyrin.A genomic DNA library was constructed and screened to obtain the corresponding lipase gene.The sequenced DNA fragment contains an open reading frame of 945bp,which was denoted as the lipX gene,from which a protein sequence LipX was deduced of 315amino acid res-idues with a molecular mass of 35,028Da.This protein contained the bacterial lipase GNSMG (GxSxG,x represents any amino acid residue)and HG consensus motifs.The recombinant pET28a(?)/lipX gene was overexpressed in heterologous host Escherichia coli BL21(DE3)cells to overproduce the lipase protein LipX His with a 69histidine tag at its C-terminus.Nickel affinity chromatography was used for purification of the expressed recombinant lipase.The maximum lipolytic activity of the purified recombinant lipase was obtained at temperature of 30°C and pH 8.0with p -nitrophenyl myristate (C14)as a substrate.Thermostabil-ity assay indicated that the recombinant LipX His is a cold-adapted lipase,which was active in 10%methanol,ethanol,acetone and 30%glycol,and inhibited partially by Zn 2?,Co 2?,Mn 2?,Fe 3?and EDTA.Most non-ionic detergents,such as DMSO,Triton X-100,Tween 60and Tween 80enhanced the lipase activity but 1%SDS completelyinhibited the enzyme activity.Additionally,the highest lipolytic rate of the recombinant LipX His lipase was achieved when p -nitrophenyl myristate was used as a substrate,among all the p -nitrophenyl esters tested.Keywords Cold-adapted lipase ÁGenomic DNA library ÁRecombinant lipase ÁPsychrobacter ÁDeep-sea sedimentIntroductionLipases (triacylglycerol acyl hydrolases,E.C.3.1.1.3)cata-lyse the hydrolysis of long-chain acylglycerols and widely exist in animal tissues,plants and microorganisms,including fungi,bacteria and archaea (Jaeger et al.1999;Reetz 2002).In addition to being used in fat hydrolysis,regiospecificity and enantioselectivity make lipases highly useful as catalysts in synthetic organic chemistry and biotechnological appli-cations (Jaeger et al.1999;Schmidt-Dannert 1999;Jaeger and Reetz 2000;Bell et al.2002).Some lipases exhibit high organic solvent tolerance and stability as their activity relies on the occurrence of an oil–water interface (Verma et al.2008;Gupta and Khare 2009).Cold-adapted lipases may offer additional opportunities for novel biotechnological applications due to their high catalytic activity at low tem-peratures and unusual specificities (Joseph et al.2007,2008).These properties offer potential economic benefits in deter-gents,textile and food industries (Salameh and Wiegel 2007),and in bioremediation of polluted soils and waters (Joseph et al.2008).For example,lipase is an industrially important subgroup of the a /b hydrolase superfamily,with 1,000tons of lipase being used in detergents every year (Bell et al.2002;Joseph et al.2007).Furthermore,the diminishing petroleum reserves and environmental consequences caused by fossil fuel consumption make lipase-catalyzed biodieselR.Chen ÁL.Guo (&)College of Life Sciences,Qingdao Agricultural University,266109Qingdao,Chinae-mail:lizhguo963@R.Chen ÁH.Dang (&)State Key Laboratory of Heavy Oil Processing and Centre for Bioengineering and Biotechnology,China University of Petroleum (East China),266555Qingdao,China e-mail:DangHY@World J Microbiol Biotechnol (2011)27:431–441DOI 10.1007/s11274-010-0475-7fuel production an attractive strategy for renewable energy production(Ranganathan et al.2008;Parawira2009;Ro-bles-Medina et al.2009).Therefore,prospecting for novel lipase genes from psychrophilic bacteria is of great interest.PCR methods have been developed for screening lipase-encoding genes from environmental microorganisms(Bell et al.2002;Fan et al.2009).However,low homology is often observed among different lipase genes making the PCR screening method inefficient and ineffective infinding novel lipase genes(Bell et al.2002).Constructing genomic (Kumura et al.1998;Zhang et al.2007)or metagenomic (Henne et al.2000;Lee et al.2006;Ha˚rdeman and Sjo¨ling 2007;Kim et al.2009;Hu et al.2010)DNA libraries provides an alternative strategy effective forfinding novel lipase genes,as no sequence homology is needed for lipase gene screening and detection.Cold adapted lipases have been isolated from marine psychrophilic and psychrotolerant bacteria such as Aero-monas(Lee et al.,2003),Moraxella(Feller et al.,1990, 1991),Moritella(Yang et al.,2008),Photobacterium(Ryu et al.,2006),Pseudoalteromonas(Zeng et al.,2004;Lo Giudice et al.,2006;de Pascale et al.,2008),Pseudomonas (Zhang&Zeng,2008),and Psychrobacter(Arpigny et al., 1993,1995;Yumoto et al.,2003;Zeng et al.,2004;Zhang et al.,2007).However,psychrophilic or psychrotolerant bacteria usually grow slowly and their lipase production is limited.Advances in genetic engineering have enabled efficient overproduction of recombinant enzymes in an appropriate heterologous host strain such as Escherichia coli(Schmidt-Dannert,1999;Joseph et al.,2008).Deep-sea sediments provide a cold environment for isolation of psychrophilic and psychrotolerant bacteria and their cold active lipases(Kobayashi et al.2008;Dang et al. 2009).In a previous study,a psychrophilic bacterium C18 with extracellular lipolytic activity was isolated from the deep-sea sediments of the Southern Okinawa Trough (Dang et al.2009).This bacterium was identified as a Psychrobacter strain(originally named K2-4L-010)based on the phylogeny of its16S rRNA gene sequence(Dang et al.2009).In the current study,we cloned and sequenced its novel lipase gene and characterized the recombinant lipase overproduced in Escherichia coli to study its ther-mostability and optimum catalytic condition.Materials and methodsConstruction of genomic DNA library for lipase gene screeningGenomic DNA library construction methods(Kumura et al. 1998;Zhang et al.2007)were adopted for lipase gene screening.In detail,genomic DNA was extracted(Sambrook and Russell2001)from Psychrobacter sp.C18cells grown in Marine Broth2216medium at20°C for48h,and par-tially digested with restriction endonuclease Sau3A I(Ta-KaRa,Japan).The digested genomic DNA fragments with length of2–7kb were recovered from an agarose gel by an E.Z.N.A.Gel Extraction Kit(OMEGA,USA)and then ligated into a expression vector plasmid pUC19(TaKaRa, Japan),which had been previously digested with restriction endonuclease Bam H I(TaKaRa,Japan).Recombinant plasmids were transformed with the heat shock and cold treatment protocol into Escherichia coli DH5a competent cells prepared by the calcium chloride protocol(Sambrook and Russell2001),as detailed in a previous publication (Dang et al.2008).Recombinants were selected using Luria–Bertani(LB)agar indicator plates supplemented with100l g/ml ampicillin,100l M IPTG and1%(w/v) tributyrin(Sigma,USA).These plates were incubated overnight at37°C,followed by incubation for a few days at 4°C.Two colonies,named pL1and pL2respectively,were found to produce a clear zone on the plates,showing potentially the lipase activity.Sequencing and lipase gene sequence analyses Recombinant plasmids were extracted from pL1and pL2, and the DNA inserts were sequenced using an ABI3770 automatic sequencer(Applied BioSystems,USA)by San-gon Biotech Co.(Shanghai,China).The putative lipase protein sequences were deduced from the gene sequences. The NCBI Blastn and Blastx programs were used to identify similar DNA sequences that encoded lipases (Altschul et al.1997).Phylogeny of the obtained lipases was analyzed using the PHYLIP software package(version 3.68;Felsenstein1989)with an alignment of the reference lipase sequences using the Clustal X program(version2.0; Larkin et al.2007).The upstream regulatory sequence signatures of the putative lipase genes were analyzed using the online BPROM program(http://linux1.softberry. com/berry.phtml?topic=index&group=programs&subgroup= promoter),to identify the-35and-10promoter sequences and the ribosomal binding site(RBS).Signal peptide sequences of the putative lipase genes were predicted by the online SignalP3.0Server program(http://www.cbs.dtu. dk/services/SignalP/)(Nielsen et al.1997).Lipase gene cloning and expression in heterologous Escherichia coliThe lipase gene sequences from pL1and pL2were found to be identical,so only pL1was selected for further study.The lipase gene(without signal peptide sequence) was PCR amplified from the original genomic DNA of thestrain Psychrobacter sp.C18using primers lp1F50-GAT-TGCCCATGGGACTATTCAAACGCTTAGGCCTTG-30 (with Nco I restriction site underlined)and lp1R50-CAT-CCGGAATTCTTACTAATCCCCTCACGAAAC-30(with Eco R I restriction site underlined).PCR was performed with an initial denaturation at95°C for5min;followed by 30cycles of95°C for1min,60°C for90s,72°C for60s; and afinal extension at72°C for10min,using the high-fidelity pfu DNA polymerase(Promega,USA).PCR products were digested overnight at16°C with Nco I and EcoR I restriction enzymes(TaKaRa,Japan),purified with an E.Z.N.A.Gel Extraction Kit(Omega,USA),and ligated into the expression vector pET-28a(?)carrying a C-ter-minal69His-tag DNA sequence(Novagen,USA).The recombinant plasmids were transformed into Esche-richia coli BL21(DE3)competent cells(Novagen, USA).The transformed colonies were screened by colony PCR and plasmid sequencing was employed for lipase gene sequence confirmation.Optimization of recombinant lipX overexpressionin heterologous Escherichia coliThe Escherichia coli BL21(DE3)cells harboring the recombinant pET28a(?)/lipX plasmid were grown at37°C and180rpm.After the cell culture’s optical density at 600nm reached0.5,the expression of the recombinant LipX lipase with the C-terminal69His-tag was induced with 0.1mM IPTG and incubated at20°C for8h.Induced cells were harvested by centrifugation(10,0009g,10min at4°C), and the cell pellet was washed with phosphate-buffered sal-ine(PBS,pH7.4).The cells were disrupted by sonication using15bursts of18kHz each for30s alternated by1min of intermittent cooling on ice(Madan and Mishra2009).Cell debris was removed by centrifugation at10,0009g for 15min at4°C.Lipase expression was checked by12%SDS polyacrylamide gel electrophoresis(SDS-PAGE).The optimal expression conditions of the recombinant lipase in the heterologous host Escherichia coli BL21 (DE3)were checked for the optimal temperature,optimal expression hours and optimal IPTG induction.The results were confirmed by SDS-PAGE and lipase activity assay. For the optimization of IPTG concentration and induction time,Escherichia coli BL21(DE3)cells containing pET28a(?)/lipX were grown in4ml LB medium at37°C, 200rpm for10h.The inoculum(1%,v/v)was transferred into100ml LB medium and the cells were induced with different concentrations(0.1–1mM)of IPTG at20°C for different incubation time after the cell culture optical density at600nm reached0.5.For the optimization of cell density at the time of induction,cells were induced with0.1mM IPTG at different culture optical densities (0.4–1.0at600nm)and were incubated for8h.For the optimization of induction temperature,cells were induced with0.1mM IPTG at optical density of0.6at600nm and incubated at different temperatures(15–37°C)for8h.The lipase expression level was assayed by12%SDS-PAGE.Purification of the recombinant lipasePurification of the recombinant lipase was carried out by a one-step histidine-tagged protein purification method using immobilized nickel affinity chromatography(His-tag chromatography)with an A¨KTA Prime Plus purifier sys-tem(GE Pharmacia,USA).Cells were collected from1l culture of IPTG-induced Escherichia coli BL21(DE3) harboring the recombinant lipX gene and resuspended witha low imidazole buffer(20mM Na2HPO4–NaH2PO4,pH7.4,0.5M NaCl and25mM imidazole).After sonication the cell lysate was passed through a0.45l m syringe-end filter and loaded on a His-trap nickel affinity column(GE Healthcare,USA),which had already been equilibrated with the low imidazole buffer.The column was extensively washed with an intermediate imidazole buffer(20mM Na2HPO4–NaH2PO4,pH7.4,0.5M NaCl,50mM imid-azole)to remove any unspecifically bound and unbound proteins.The target lipase proteins were eluted by using a high imidazole buffer(20mM Na2HPO4–NaH2PO4,pH 7.4,0.5M NaCl,500mM imidazole).The purified lipase was checked using12%SDS-PAGE and the lipase activity was assayed by the above described method.Lipase activity and protein content assayLipase activity assay was performed using p-nitrophenyl palmitate(p-NPP)as a substrate(Winkler and Stuckmann 1979).The reaction mixture contained200l l sub-strate(0.1mM p-NPP ester in2-propanol),1,500l l buffer (100mM Tris-HCl buffer,pH7.0,with0.1%(w/v)Triton X-100and0.1%(w/v)Arabic gum powder).Lipase solu-tion(100l l)was added to the mixture after5min prew-arming at30°C.Reaction was stopped by adding1ml2% SDS(sodium dodecyl sulfonate)solution after20min incubation.Absorbance at405nm was determined.One unit of lipase activity was defined as the release of1l mol of p-nitrophenol per min.Lipase concentration was mea-sured by Bradford dye method(Bradford1976),with absorbance measured at595nm and BSA(bovine serum albumin)used as a protein standard.Characterization of the lipaseThe recombinant lipase molecular weight was deter-mined by SDS-PAGE with standard protein molecular weight markers(TaKaRa,Japan).The optimum lipase reaction temperature was determined by measuring thelipase reaction rate at different temperatures(15–60°C) under standard assay conditions.The lipase thermostability was determined by measuring the residual lipase activity after incubating the lipase at different temperatures(-20–70°C)for1h.The optimum lipase reaction pH was determined between pH3.6and pH11.0.The lipase pH stability was determined by measuring the residual lipase activity after incubating the lipase at30°C for1h in the following buffers:200mM sodium acetate(pH3.6,4.0,5.0 and5.6);PBS(pH5.7,6.0,6.5,7.2,7.4and8.0);200mM Tris-HCl(pH7.2and8.05);200mM Glycine-NaOH(pH 9.5,10.0,10.6and11).The effect of salinity on the lipase activity was determined with the measurement of the lipase activity after incubating the lipase in500mM Tris-HCl buffer(pH8.0)containing a specific NaCl concentration(0, 1,5,10,20,50,100or500mM)for20min at30°C.The effect of various metal ions(CoSO4,CuSO4,FeSO4, MgSO4,MnSO4,ZnSO4,CaCl2,FeCl3and KCl)and EDTA on the lipase activity was determined with the measurement of the lipase activity after incubating the lipase(in500mM Tris-HCl buffer,pH8.0)at30°C for20min supplemented with afinal concentration of1mM of the individual ion solution.The effect of various detergents on the lipase activity was determined with the measurement of the lipase activity after incubating the lipase in500mM Tris-HCl buffer(pH8.0)containing1%(w/v)of detergent SDS, Triton X-100,Tween60,Tween80or DMSO for20min at 30°C.The effect of various organic solvents on the lipase activity was determined by adding them in the reaction mixtures at a concentration of10,30or50%of a specific organic solvent(methanol,ethanol,glycol,acetonitrile or acetone)respectively then the enzyme activity was assayed. Substrate specificity of the lipase was determined at30°C and pH8.0on p-nitrophenyl ester substrates with variable chain length(C2to C18)by measuring the amount of p-nitrophenol released by lipase-catalyzed hydrolysis(Lee et al.1993).The detailed experiments for the effects of the various treatments on the lipase activity followed the descriptions in the above lipase activity assay section. Nucleotide sequence accession numbersThe gene sequence lipX of the Psychrobacter sp.C18 lipase was deposited in the GenBank database with accession number GU583649.ResultsLipase gene sequence analysesTwo colonies pL1and pL2showing clear halos on the tributyrin indicator plates were identified from the genomic DNA library of Psychrobacter sp.C18,indicating that these2colonies might harbor the recombinant plasmids with the lipase genes.The DNA inserts were found to be about3.5kb on the recombinant plasmids of these2col-onies.After DNA sequencing,the nucleotide sequences of the two plasmid inserts were found to be identical.The lipase gene sequence,named lipX,from colony pL1was selected for further study.The nucleotide sequence of lipX revealed an open reading frame(ORF)comprising945bp,encoding a putative protein sequence of315amino acids with a pre-dicted molecular weight of35,028Da(Fig.1).This ORF is preceded by a putative ribosome-binding site(AAGGA) at7bases upstream of the start codon ATG,the-35box (TTGTAG)and-10box(TGCTATAAA)were also iden-tified(Fig.1).The deduced LipX protein sequence has the GNSMG and HG fragments starting at residue139and75 (Fig.1);the GxSxG and HG consensus motifs are ubiq-uitous as the active sites in bacterial lipases.A sequence fragment of27amino acid residues at the N-terminus of LipX was predicted to be a signal peptide(Fig.1),indi-cating that LipX is potentially an extracellular bacterial lipase.The lipX gene had sequence identities of only80.9% with the lip gene(GenBank accession number X67712)of the Antarctic facultative psychrophile Psychrobacter immobilis B10(Arpigny et al.,1993,1995),and80.6% with the lipA1and pAL1-3genes(GenBank accession numbers AM229326and AM229327)of the Antarctic Psychrobacter sp.7195(Zhang et al.,2007).The deduced LipX protein sequence had86.3%identity with lipase Lip3 (GenBank accession number CAA37863)of the Antarctic psychrotroph Moraxella sp.TA144(Feller et al.,1991), 86.0and85.3%identities with lipases LipA1and PAL1-3 (GenBank accession numbers CAJ76164and CAJ76165) of Psychrobacter sp.7195(Zhang et al.,2007),and85.1% identity with lipase Lip(GenBank accession number CAA47949)of Psychrobacter immobilis B10(Arpigny et al.,1993,1995).Phylogenetic analysis confirmed that the LipX sequence was affiliated with known lipase sequences obtained mainly from psychrophilic bacteria, especially the Psychrobacter(Fig.2).Expression and optimization of expression of lipXThe lipX gene was amplified with no signal peptide from genomic DNA.The cloned lipX gene was expressed under the control of the strong T7RNA polymerase transcription promoter by using the pET28a(?)and E.coli BL21(DE3) expression system.The recombinant lipase protein was named LipX His(LipX?6xHis tag).Overproduction of LipX His was confirmed by SDS-PAGE and lipase activity assays,indicating that the lipX gene indeed encoded afunctional bacterial lipase.Due to the confirmed lipolytic activity of the gene product and its medium-level of sequence identities with known lipase genes,lipX might represent a novel lipase gene.The optimal expression of LipX His was achieved by induction with 0.2mM IPTG at 20°C for 8h after the E.coli BL21(DE3)cell culture optical density reached 0.6at 600nm (Fig.3a).Fig.1The nucleotide and deduced amino acidsequence of lipase LipX from the deep-sea psychrophilic bacterium Psychrobacter sp.C18Purification and characterization of the recombinant LipX His lipaseThe purification of the recombinant lipase LipX His using the His-tag chromatography achieved a 10.7-fold increase of target protein purity (Table 1).The purified LipX His showed a single band with an apparent molecular mass of about 35kDa on SDS-PAGE,consistent with thecalculated LipX His molecular weight (34,477.1Da)(Fig.3b).An active recombinant lipase with a specific activity of 623.3U/mg was obtained (Table 1).Effect of temperature on LipX His lipase activity and stabilityPurified lipase LipX His showed its maximum activity toward p -NPP (C16)at 30°C,when assayed at pH 7.4.Its lipase activity was reduced to 70%of the maximum value at 35°C and to 35%of the maximum activity at 45°C (Fig.4a).The thermostability of the recombinant LipX His was determined by preincubating the enzyme at different temperature (-20,4,20,30,40,55,65and 70°C)for 1h,then the remaining lipase activity was measured at 30°C.The result revealed that the recombinant lipase activity was very stable at temperature from -4to 30°C (Fig.4b).When the temperature reached above 40°C,the lipase activity declined very rapidly.When the lipase was incubated at 65°C for 1h,the lipase activity reduced to 30%of the initial activity,and the enzyme activity was reduced most rapidly in the first 15min.When the enzyme was incubated at 70°C for 15min,the enzyme activity was reduced by more than 65%.Taken together,LipX His possessed a typical property of cold-adaptedlipases.Fig.3a SDS-PAGE analysis of pET28a(?)/lipX induced with different ne 1:whole-cell proteins from E.coli BL21(DE3)without pET28a(?)/lipX ;Lane 2:whole-cell proteins from E.coli BL21(DE3)harboring pET28a(?)/lipX uninduced;Lane 3:induced with 0.1l M IPTG;Lane 4:induced with 0.2l M IPTG;Lane 5:induced with 0.6l M IPTG;Lane 6:protein molecular weight markers.b SDS-PAGE analysis of the purified recombinant lipase LipX His ,Lane 1the target protein eluted by high imidazole buffer,Lane 2:protein molecular weight markersTable 1Purification of LipX His from E.coli BL21(DE3)Step Total activity (U)Total protein (mg)Specific activity (U/mg)Purification (fold)Overall yield (%)Crude extract 4,0056958.04 1.0100Nickel-NTA2,368.53.8623.310.759.1Effects of pH on LipX His lipase activity and stability The purified LipX His was active in the pH range 6.0–11.0,with a maximum activity at pH 8.0(Fig.5a).LipX His was very stable at a pH range of 7.2–10.0for 24h incubation at 4°C (Fig.5b).Effect of NaCl concentration on LipX His lipase activity The purified LipX His lipase activity was increased by NaCl at 1–500mM NaCl concentrations,and the activity was the highest at 10mM NaCl.This result was related to the host strain Psychrobacter sp.C18that was isolated from a marine environment (Table 2).Effect of metal ion on LipX His lipase activityThe purified LipX His lipase activity was partially inhibited by Co 2?,Mn 2?,Fe 3?and EDTA,and strongly inhibited by Zn 2?(Table 3).Other tested metal ions had little or slight enhancement effect on the LipX His lipase activity.Effect of organic solvent on LipX His lipase activityThe organic solvent of 10%ethanol or acetone was found to enhance the purified LipX His lipase activity (Table 4).But at 30or 50%concentration,most of the organic solvents were found to reduce the LipX His lipase activity,with the only exception of 30%glycol that was found to enhance the lipase activity.Acetone,acetonitrile and ethanol at50%pH 3.6–5.6);PBS (pH 5.7–8.0);Tris-HCl (pH 7.19–9.10);glycine-NaOH (pH 8.6–10.6)concentration were found to abolish completely the LipX His lipase activity (Table 4).Effect of detergent on LipX His lipase activityThe tested non-ionic detergents DMSO,Triton X-100,Tween 60and Tween 80were found to increase the LipX His lipase activity (Table 5),while 1%SDS com-pletely inhibited the lipase activity.LipX His lipase substrate specificityThe LipX His lipase substrate specificity assay indicated that long chain fatty acids of p -nitrophenyl esters were better substrates for LipX His ,and the highest lipase activity was achieved with the C14substrate (Fig.6).DiscussionIn this study,a lipase gene,lipX ,was detected and cloned from a psychrophilic deep-sea sediment Psychrobacter sp.strain C18(Dang et al.,2009).The lipX gene was found to be novel based on its highest sequence identity (80.9%)with known GenBank lipase gene sequences.Numerous Psychrobacter strains were found previously to harbor lipase genes,most of which encode cold-adapted lipases (Arpigny et al.1993,1995;Yumoto et al.2003;Kulakova et al.2004;Zeng et al.2004;Zhang et al.2007).Our current study indicates that the recombinant lipX -encoded protein,LipX His ,is also a cold-adapted lipase,with the optimum reaction temperature at 30°C.Our results also indicate that the marine Psychrobacter strains may be an important resource for prospecting novel extreme lipases for various potential applications.The cold-adapted lipase LipX was found to have a calculated molecular weight of 35,028Da.Gene overex-pression of the recombinant LipX His in E .coli BL21(DE3)also produced a recombinant protein with similar apparentTable 3Effect of various metal ions on LipX His lipase activity Metal ions (1mM)or EDTA (1mM)Relative activity (%)None 100.0CoSO 485.3±0.8CuSO 4101.6±1.3MnSO 485.8±2.4FeCl 374.9±1.1FeSO 4103.2±0.9CaCl 2103.1±1.4KCl 109.8±0.5ZnSO 417.4±2.9MgSO 4104.7±1.5EDTA64.8±0.7Data are given as means ±SD,n =3Table 2Effect of different concentrition of NaCl on LipX His lipase activityNaCl Concentration (mM)Relative activity (%)None 100.01108.6±0.95119.3±0.910154.9±1.320120.8±2.050117.2±1.6100114.5±2.1500102.6±1.4Data are given as means ±SD,n =3Table 4Effect of organic solvents on the LipX His lipase activityData are given as means ±SD,n =3Organic solventRelative activity (%)Concentration (10%w/v)Concentration (30%w/v)Concentration (50%w/v)Control 100.0100.0100.0Methanol 101.6±1.380.1±0.833.7±1.6Ethanol 115.2±1.729.2±1.50Glycol49.8±2.3114.9±0.882.7±1.4Acetonitrile 52.5±0.927.3±0.60Acetone109.8±1.228.3±1.1Table 5Effect of various detergents on LipX His lipase activity DetergentsFinal concentrationin reaction mix (%w/v)Relative activity (%)Control –100DMSO 1107.9±1.2TritonX-1001112.8±0.6Tween 601114.8±2.1Tween 801119.5±1.1SDS1Data are given as means ±SD,n =3molecular weight about35kDa.Most of known Psych-robacter lipases have been reported to have a similar molecular weight.For example,the cold-adapted lipase LipA1from the Antarctic deep-sea psychrotrophic Psych-robacter sp.7195was35,210Da(Zhang et al.,2007),the lipase Lip1from the Antarctic facultative psychrophile Psychrobacter immobilis B10was35,288Da(Arpigny et al.,2003),and the lipase Lip3from a Psychrobacter-related strain,the Antarctic psychrotroph Moxaxella TA144,was34,662Da(Feller et al.,1991).Phylogenetic analysis indicates that these cold-adapted lipases may be closely related during gene evolution(Fig.2).Our recombinant cold-adapted lipase LipX His was more stable than the previously reported cold-adapted lipases, such as Lip3from Moraxella TA144(Feller et al.,1991), LipA from the Antarctic deep sea psychrotrophic Pseudo-monas sp.7323(Zhang&Zeng,2008),LipP from the Alaskan psychrotroph Pseudomonas sp.strain B11-1 (Choo et al.,1998),and the lipase from the facultatively psychrophilic Acinetobacter O16(Breuil&Kushner, 1975).The ability of cold-adapted enzymes to catalyze reactions at low or moderate temperature offers a great industrial and biotechnological potential(Gomes&Stei-ner,2004).The cold activity and thermolability might be a key factor to influence the successful application of the cold-adapted lipases.Thus,LipX may be very useful for various applications with the requirement of high catalytic rate at low temperature and resistance to temperature change in a certain range.It has been reported that metal ions and metal ion che-lators affect the lipase activity(Chakraborty and Paulraj 2009).Certain metal ions and EDTA showed inhibitory effect over the recombinant enzyme LipX His and reduced its lipase activity(Table3).However,LipX His also showed very active and stable properties in some of the other tested metal ions.LipX His is active and stable in some of the tested detergents and organic solvents,especially in methanol and ethanol.This indicated that LipX may be useful for biodiesel production and organic synthesis. Biodiesel,defined as monoalkyl fatty acid esters,is pres-ently evaluated as a promising alternative fuel that may have the potential to replace diesel.Currently there are only a few bacterial lipases that have been found to be effective in esterification and biodiesel production,such as the lipases from Burkholderia cepacia(Noureddini et al., 2005)and Pseudomonasfluorescens B68(Luo et al.,2006). LipX from Psychrobacter sp.C18may provide another option for this application.The various properties of LipX may also be explored to offer potential applications and economical benefits in many other microbial applications, such as bioremediation of polluted soils and waters. Acknowledgments The authors thank Hu Zhu for his assistance in the project.This work was supported by China Ocean Mineral Resources R&D Association grants DYXM-115-02-2-20and DYXM-115-02-2-6,Hi-Tech Research and Development Program of China grant2007AA091903,China National Natural Science Foundation grant40576069,Fundamental Research Funds for the Central Uni-versities of China grant09CX05005A,and Foundation of the State Key Laboratory of Heavy Oil Processing,China University of Petroleum grant SKL2010-02.ReferencesAltschul SF,Madden TL,Scha¨ffer AA,Zhang J,Zhang Z,Miller W, Lipman DJ(1997)Gapped BLAST and PSI-BLAST:a new generation of protein database search programs.Nucleic Acids Res25:3389–3402Arpigny JL,Feller G,Gerday C(1993)Cloning,sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10.Biochim Biophys Acta117:331–333Arpigny JL,Feller G,Gerday C(1995)Corrigendum to‘‘Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10’’.Bio-chim Biophys Acta1263:103Bell PJ,Sunna A,Gibbs MD,Curach NC,Nevalainen H,Bergquist PL(2002)Prospecting for novel lipase genes using PCR.Microbiology148:2283–2291Bradford MM(1976)A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.Anal Biochem72:248–254 Breuil C,Kushner DJ(1975)Partial purification and characterization of the lipase of a facultatively psychrophilic bacterium(Acine-tobacter O16).Can J Microbiol21:434–441Chakraborty K,Paulraj R(2009)Purification and biochemical characterization of an extracellular lipase from Pseudomonas fluorescens MTCC2421.J Agric Food Chem57:3859–3866。