TaNAC2 a NAC-type wheat transcription factor conferring
小麦转录因子基因TaNAC67参与调控穗长和每穗小穗数

作物学报ACTA AGRONOMICA SINICA 2019, 45(11): 1615 1627/ ISSN 0496-3490; CN 11-1809/S; CODEN TSHPA9E-mail: zwxb301@DOI: 10.3724/SP.J.1006.2019.91009小麦转录因子基因TaNAC67参与调控穗长和每穗小穗数张宏娟1,2李玉莹2,3苗丽丽2王景一2李超男2杨德龙1,*毛新国1,2,*景蕊莲21甘肃农业大学生命科学技术学院, 甘肃兰州 730070; 2中国农业科学院作物科学研究所/ 农作物基因资源与基因改良国家重大科学工程/ 农业部农作物种质资源创新与利用重点开放实验室, 北京 100081; 3河南农业大学农学院, 河南郑州 450002摘要: NAC转录因子是植物特有的一类转录因子, 在植物生长发育和逆境胁迫应答反应中发挥着重要作用。
前期研究表明, TaNAC67参与对多种逆境胁迫的应答, 过量表达能增强拟南芥的抗逆性。
为进一步揭示其在调控小麦主要农艺性状发育方面的作用, 本研究以36份普通小麦组成的高多态性群体为材料, 测序分析了TaNAC67-6A、TaNAC67-6B、TaNAC67-6D序列多态性, 发现TaNAC67-6A启动子区–1516 nt有1个A/G转换SNP, 在–873~ –748 nt处有1个126 bp的InDel; TaNAC67-6B启动子区–2014和–1916 nt处各有1个C/T转换SNP; TaNAC67-6D启动子区–1795 nt有1个T/G颠换SNP, 编码区357 nt处有1个C/T转换SNP。
根据多态性分别开发了功能分子标记, 扫描由282份普通小麦构成的自然群体, 并将基因型和表型性状检测结果进行关联分析, TaNAC67-6A、TaNAC67-6B的标记与表型性状无显著关联, 而TaNAC67-6D的2个标记SNP-D-1和SNP-D-2分别与小麦穗长和每穗小穗数显著相关。
植物NAC转录因子的研究进展

植物NAC转录因子的研究进展王芳;孙立娇;赵晓宇;王婕婉;宋兴舜【摘要】NAC (NAM、ATAF1/2、CUC2)蛋白家族是植物特异性转录因子超家族,广泛存在于多样的植物中.大多数NAC蛋白具有保守的DNA结合结构域,其大约150个氨基酸位于蛋白质的N末端,并且在C末端区域具有高度可变的转录调节区域.该类家族基因在多个生物过程中发挥关键作用,如植物生长、发育和应激反应网络.因此,NAC转录因子被持续关注.近年来,尤其是近5年来对NAC的家族成员的功能研究获取了突破性的发现.总结NAC转录因子的最新研究进展,旨在为植物的遗传改良和育种提供参考.【期刊名称】《生物技术通报》【年(卷),期】2019(035)004【总页数】6页(P88-93)【关键词】NAC转录因子;生长发育;胁迫;功能【作者】王芳;孙立娇;赵晓宇;王婕婉;宋兴舜【作者单位】东北林业大学生命科学学院,哈尔滨150040;东北林业大学生命科学学院,哈尔滨150040;东北林业大学生命科学学院,哈尔滨150040;东北林业大学生命科学学院,哈尔滨150040;东北林业大学生命科学学院,哈尔滨150040【正文语种】中文NAC名称来自矮牵牛(Petunia hybrida)的NAM及拟南芥的ATAF1/2和CUC2的第一个字母,最初由Souer等[1]和Aida等[2]发现。
NAC是植物中最大的转录因子家族之一,全基因组研究表明拟南芥(Arabidopsis thaliana)中有117个NAC基因,水稻(Oryza sativa)中有151个,大豆(Glycine max)和烟草(Nicotiana tabacum)中各有101和152个[3-6]。
越来越多的研究已经证实植物的生长发育过程及胁迫条件下的生存与NAC转录因子有关,NAC转录因子家族成员的功能研究受到了公众的广泛关注。
笔者总结了近年来NAC转录因子在调控细胞增殖与寿命、代谢物合成、细胞程序化死亡、胁迫响应、信号传导等方面的突破性进展(表1)。
小麦中带有核定位信号NAC转录因子的鉴定及分析

第44卷第6期2021年11月河北农业大学学报JOURNAL OF HEBEI AGRICULTURAL UNIVERSITYVol.44 No.6Nov.2021小麦中带有核定位信号NAC转录因子的鉴定及分析耿怀民1,张艳俊1,2,李聚贤1,崔钟池1,王 菲1,王海燕1,刘大群1(1.河北农业大学 植物保护学院/河北省农作物病虫害生物防治技术创新中心,河北 保定 071000;2.邢台职业技术学院 资源与环境工程系,河北 邢台 054000)摘要:NAC(NAM/ATAF/CUC)是植物特有的一类转录因子,在生物和非生物胁迫中发挥着重要作用。
本研究从小麦基因组中鉴定出9个C末端带有核定位信号的NAC转录因子,对其理化性质、系统发育模式、保守基序进行了分析。
结果表明,这9个NAC转录因子均是亲水蛋白,分子量范围在19.63~28.92 kD之间,等电点范围在8.40~9.87之间,同一亚族成员具有相似的保守基序。
对这9个NAC转录因子在小麦与条锈菌、赤霉菌互作过程中的表达变化进行了模拟分析,发现TaNACL-B1和TaNACL-D1的表达受条锈菌和赤霉菌的诱导。
利用实时荧光定量PCR(Quantitative real-time PCR, qPCR)技术检测了接种叶锈菌的小麦中TaNACL-A1、TaNACL-B1和TaNACL-D1的表达模式,结果显示,3个基因的表达量在小麦与叶锈菌亲和互作与非亲和互作中存在明显差异,均在12~72 h呈上升趋势,在亲和组中的表达量高于非亲和组,表明它们可能在小麦与叶锈菌互作过程中发挥负调控作用。
综上所述,本研究初步筛选到了与小麦抗病相关的带有核定位信号的NAC转录因子,为研究NAC转录因子在小麦与病原物互作过程中的作用提供了参考。
关 键 字:小麦;NAC转录因子;核定位信号;生物信息学分析;叶锈菌中图分类号:S432.1 开放科学(资源服务)标识码(OSID):文献标志码:AGenome-wide identification of NAC transcription factors with nuclearlocalization signal in wheatGENG Huaimin1, ZHANG Yanjun1, 2, LI Juxian1, CUI Zhongchi1, WANG Fei1,WANG Haiyan1, LIU Daqun1(1. College of Plant Protection, Hebei Agricultural University / Biological Control technological innovation Centerof Plant Diseases and Plant Pests of Hebei Province, Baoding 071000, China; 2. Department of Resource andEnvironmental Engineering, Xingtai Polytechnic College, Xingtai 054000, China ) Abstract: NAC (NAM / ATAF / CUC, NAC) is a kind of transcription factors unique to plants and plays animportant role in biotic and abiotic stresses. In this study, nine NAC transcription factors with nuclear localizationsignal at C-terminal were identified from wheat genome, and their physicochemical properties, phylogentic modeland conserved motifs were analyzed. The results showed that nine NAC transcription factors were hydrophilic收稿日期:2021-04-19基金项目:河北省自然科学基金资助项目(C2020204028).第一作者: 耿怀民(1998-),男,河北河间人,硕士研究生,主要从事分子植物病理学研究. E-mail:*****************通信作者:王海燕(1977-),女,河北遵化人,博士,教授,主要从事分子植物病理学研究. E-mail:********************本刊网址:文章编号:1000-1573(2021)06-0009-08DOI:10.13320/ki.jauh.2021.009510第44卷河北农业大学学报proteins with molecular weight ranging from 19.63~28.92 kD, and isoelectric point ranging from 8.40 to 9.87. The same groups contain similar conserved motifs. Stimulation analysis showed that the expression of TaNACL-B1 and TaNACL-D1 was induced by Puccinia striiformis f. sp. tritici and Fusarium graminearum. The expression patterns of three genes, TaNACL-A1, TaNACL-B1, TaNACL-D1 in wheat inoculated with Puccinia triticina (Pt) were detected by quantitative real-time PCR (qPCR). The expression of TaNACL genes showed significant difference between compatible and incompatible interaction of wheat and Pt, and upregulated expression from 12 to 72 h. The expression level of TaNACL genes in the incompatible interaction is higher than that in the compatible interaction, indicating that they might play a negative role in the interaction of wheat and Pt. Taken together, NAC transcription factors with nuclear localization signals related to wheat disease resistance were screened, which provided a reference for studying the role of NAC transcription factors in the interaction between wheat and pathogens.Keywords:wheat; NAC transcription factors; Nuclear location signal; bioinformatic analysis; leaf rust1997年,Aida等人首先报道了NAC结构域,并取编码蛋白N端的保守序列首字母命名为 NAC (矮牵牛花NAM、拟南芥ATAF1/2、CUC2)[1]。
来自荞麦的C-糖苷化酶基因及其应用[发明专利]
![来自荞麦的C-糖苷化酶基因及其应用[发明专利]](https://img.taocdn.com/s3/m/3d6114db0342a8956bec0975f46527d3240ca63e.png)
专利名称:来自荞麦的C-糖苷化酶基因及其应用专利类型:发明专利
发明人:中村典子,兴津奈央子,胜元幸久
申请号:CN202080068986.X
申请日:20200925
公开号:CN114450404A
公开日:
20220506
专利内容由知识产权出版社提供
摘要:本发明提供一种具有蓝色系花色的转化植物或其自繁或者杂交后代,或者它们的营养繁殖体、植物体的一部分、组织或细胞。
本发明通过将来自荞麦的C‑糖苷化酶(CGT)基因或其同源基因导入宿主植物,使花翠素型花色素苷与黄酮单‑C‑糖苷在植物的细胞内共存。
申请人:三得利控股株式会社
地址:日本大阪府
国籍:JP
更多信息请下载全文后查看。
植物转录因子NAP亚家族的研究进展_范凯

中国农业科学 2014,47(2):209-220Scientia Agricultura Sinica doi: 10.3864/j.issn.0578-1752.2014.02.001植物转录因子NAP亚家族的研究进展范 凯,王学德,袁淑娜,王 铭(浙江大学农业与生物技术学院,杭州 310058)摘要:植物转录因子NAP(NAC-Like,Activated by AP3/PI)是近年来发现的一类与调控植物生长发育、控制叶片衰老以及响应外界环境胁迫等功能有关的转录因子,是NAC(NAM、ATAF1/2和CUC2)家族中的一个重要成员,也是一类植物特有的转录因子。
转录因子NAP在结构上具有NAC家族的保守结构,即在N端具有保守的NAC 区以及在C末端具有相对多样性的TAR区,但也有不同于其它NAC亚家族的一些特点,如其TAR区也有一定的保守性等;同时,NAP亚家族的基因表达产物主要集中在细胞核中,表明转录因子NAP是一个核蛋白;再者转录因子NAP的基因主要包括3个外显子和2个内含子。
自从第一个转录因子NAP于1998年由Robert等在拟南芥中对控制花发育的AP3/PI的靶基因进行研究时发现以来,目前已在水稻、小麦、大豆、棉花、竹子、葡萄、番红花等植物中相继发现,表明NAP是存在于植物界中的一个特有的转录因子。
转录因子NAP具有多种生物学功能,广泛参与植物种子、根、花等的生长发育,对植物生长发育过程起着重要的调节作用;与此同时,转录因子NAP也在叶片凋亡过程中起着举足轻重的作用,对叶片在衰老过程中涉及到的大分子物质的降解以及营养物质的再分配等过程起着重要的调控作用;而且,转录因子NAP对包括干旱、盐渍、冷害等外界环境胁迫有一定的响应,是一类参与调控植物体内各种生理反应的关键因子;同时,转录因子NAP也与植物尤其是农作物的品质有密切的关系,这也为农作物育种提供了一种新的思路和方法。
最新研究表明,NAP主要受脱落酸和乙烯调控,已发现一个定位在高尔基体的PP2C家族中的成员SAG113为转录因子NAP的一个直接的靶基因,而且发现SAG113在控制气孔运动方面尤其是在衰老叶片中可能是ABA调控中的一个负调控元件,通过酵母杂交试验以及电泳迁移率变动分析技术得出转录因子NAP受到ABA的调控并直接与其靶基因SAG113启动子区域的一个特定的区域进行专一性的结合,即在衰老叶片中转录因子NAP通过ABA-NAP-SAG113 PP2C调节链提高其靶基因SAG113的表达,以及通过促进气孔开放从而导致水分丧失和通过足够的氧气进入到组织中使得乙烯释放进而使呼吸作用加快等加速叶片衰老的信号这一调控机制。
果子蔓 分子鉴定

果子蔓分子鉴定果子蔓(Guzmania lingulata)的分子鉴定通常涉及以下步骤和技术:一、DNA提取。
1. 材料选择。
- 选取果子蔓健康的叶片组织作为提取DNA的材料。
叶片细胞中含有完整的基因组DNA,并且相对容易处理。
2. 提取方法。
- 可以采用CTAB(十六烷基三甲基溴化铵)法。
将叶片组织研磨成细粉后,加入CTAB提取缓冲液,其中含有Tris - HCl(pH值约8.0)以维持合适的酸碱度,EDTA (乙二胺四乙酸)用于螯合金属离子,防止DNA酶对DNA的降解,β - 巯基乙醇以保护DNA免受氧化。
- 在适当的温度(如65°C左右)下温浴一段时间,使细胞裂解,蛋白质变性,然后通过氯仿 - 异戊醇抽提除去蛋白质等杂质,最后用异丙醇或乙醇沉淀DNA,得到较为纯净的果子蔓基因组DNA。
二、基因选择与扩增。
1. 基因选择。
- 常用的基因包括nrDNA ITS(核糖体DNA内转录间隔区)序列。
nrDNA ITS区域在植物中具有较高的变异性,能够区分不同的物种甚至种下类群。
对于果子蔓来说,ITS序列可以提供足够的信息用于准确鉴定。
- 另外,叶绿体基因如matK(成熟酶K基因)也可作为候选基因。
matK基因进化速率适中,在植物系统发育研究和物种鉴定中具有重要意义。
2. PCR扩增。
- 针对选择的基因,设计特异性引物。
例如对于ITS序列,有通用引物可以用于扩增。
- 在PCR反应体系中,包含模板DNA(即前面提取的果子蔓基因组DNA)、dNTPs (脱氧核糖核苷三磷酸,作为合成DNA的原料)、Taq聚合酶(用于催化DNA合成)、缓冲液以及特异性引物。
- 通过合适的PCR程序,如预变性(如94°C,3 - 5分钟),然后进行多个循环的变性(94°C,30 - 60秒)、退火(根据引物的Tm值确定温度,如50 - 60°C,30 - 60秒)和延伸(72°C,1 - 2分钟),最后再延伸(72°C,5 - 10分钟),得到目的基因的扩增产物。
(英汉对照)分子生物学--名词解释

(英汉对照)分子生物学--名词解释α helix α螺旋A helical secondary structure in proteins.Pl. α helices. 蛋白质中一种螺旋形的二级结构。
复数:α helices。
α-amanitin α鹅膏蕈碱A toxin that inhibits the three eukaryotic RNA polymerases to different extents. Name derives from mushroom of genus Amanita in which toxin is found. 一种能不同程度地抑制三种真核生物RNA聚合酶的毒素。
名称来自于产生此毒素的Amanita属蘑菇。
β-galactosidase β-半乳糖苷酶Enzyme that cleaves lactose into galactose and glucose. Name origin: the bond cut by this enzyme is called a β-galactosidic bond. 将乳糖分解为半乳糖和葡萄糖的酶。
名称来源:该酶切割的键称为β-半乳糖苷键。
β sheet β折叠A secondary structure in proteins, relatively flat and formed hydrogen bonding between two parallel or anti-parallel stretches of polypeptide. 蛋白质的一种二级结构,相对平坦,在两条平行的或反向平行的肽段之间形成氢键。
σ subunit σ亚基Component of prokaryotic RNA polymerase holoenzyme. Required for recognition of promoters. 原核生物RNA聚合酶全酶的组成成分。
关于制备山竹醇的考题

以下是一道关于制备山竹醇(Mangosteenol)的考题:
题目:制备山竹醇的合成路线
描述:山竹醇是一种从山竹(Mangosteen)中提取的天然化合物,具有抗氧化和抗炎等生物活性。
请根据已知的化学反应和合成方法,提供制备山竹醇的合成路线。
提示:山竹醇的化学结构是2,3-二甲氧基-9,10-二氢-4H,8H-苯并[1,2-b]噁嗪-4,8-二醇。
解答(仅提供一个可能的合成路线):
1. 以山竹果皮为原料,通过石油醚(Petroleum ether)的超声提取或其他提取方法,得到山竹果皮提取物。
2. 对山竹果皮提取物进行柱层析(Column chromatography)或其他适当的色谱分离技术,以分离出山竹醇。
3. 对分离得到的化合物进行结构鉴定和纯化,利用NMR(核磁共振)、MS(质谱)等分析技术确保其纯度和结构。
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Journal of Experimental Botany,Vol.63,No.8,pp.2933–2946,2012 doi:10.1093/jxb/err462Advance Access publication13February,2012This paper is available online free of all access charges(see /open_access.html for further details)RESEARCH PAPERTaNAC2,a NAC-type wheat transcription factor conferring enhanced multiple abiotic stress tolerances in Arabidopsis Xinguo Mao,Hongying Zhang,Xueya Qian,Ang Li,Guangyao Zhao and Ruilian Jing*The National Key Facility for Crop Gene Resources and Genetic Improvement,Institute of Crop Science,Chinese Academy of Agricultural Sciences,Beijing100081,PR China*To whom correspondence should be addressed.E-mail:jingrl@Received11October2011;Revised22December2011;Accepted23December2011AbstractEnvironmental stresses such as drought,salinity,and cold are major factors that significantly limit agricultural productivity.NAC transcription factors play essential roles in response to various abiotic stresses.However,the paucity of wheat NAC members functionally characterized to date does not match the importance of this plant as a world staple crop.Here,the function of TaNAC2was characterized in Arabidopsis thaliana.A fragment of TaNAC2 was obtained from suppression subtractive cDNA libraries of wheat treated with polyethylene glycol,and its full-length cDNA was obtained by searching a full-length wheat cDNA library.Gene expression profiles indicated that TaNAC2was involved in response to drought,salt,cold,and abscisic acid treatment.To test its function,transgenic Arabidopsis lines overexpressing TaNAC2–GFP controlled by the cauliflower mosaic virus35S promoter were generated.Overexpression of TaNAC2resulted in enhanced tolerances to drought,salt,and freezing stresses in Arabidopsis,which were simultaneously demonstrated by enhanced expression of abiotic stress-response genes and several physiological indices.Therefore,TaNAC2has potential for utilization in transgenic breeding to improve abiotic stress tolerances in crops.Key words:Phenotype,physiological trait,stress response,transcription factor.IntroductionEnvironmental stresses such as drought,salinity,and extreme temperature impose osmotic stress on plants and significantly affect both biomass and grain yields of crops worldwide.To protect cellular activities and maintain whole plant integrity,plants have developed various mechanisms to cope with abiotic stresses.Many stress-induced genes have been identified,including those encoding key enzymes for abscisic acid(ABA)biosynthesis(Nambara and Marion-Poll,2005),proteins involved in osmotic adaptation and tolerance to cellular dehydration(Yao et al.,2011), cellular protective enzymes(Puckette et al.,2007),numer-ous signalling proteins such as protein kinases/protein phosphatases(Zhu,2002),and transcription factors (Mochida et al.,2009).Transcription factors have been grouped into diverse families on the basis of conserved structural domains involved in DNA binding to cis-elements in the promoters of target genes,or other functional modular structures. Increasing evidence is demonstrating that numerous tran-scription factors,such as DREB,CBF,bZIP,zinc-finger, MYB,and NAC,are directly or indirectly involved in the regulation of plant defence and stress responses(Thomashow, 1999;Zhu,2002;Seki et al.,2003;Shinozaki et al.,2003; Fujita et al.,2004;Mukhopadhyay et al.,2004;Chen et al., 2006).The NAC(NAM,ATAF,and CUC)superfamily is one of the largest transcription factor families found only in plants.Proteins of this family are characterized by a highly conserved DNA-binding domain,known as the NAC domain,in the N-terminal region.The C-terminal region of NAC proteins,which usually contains a transcriptional activation domain,is highly diversified both in length and sequence(Ooka et al.,2003).More than100members of this family have been identified in both Arabidopsis and riceª2012The Author(s).This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License(/licenses/by-nc/3.0),which permits unrestricted non-commercial use,distribution,and reproduction in any medium,provided the original work is properly cited.(Qu and Zhu,2006;Fang et al.,2008).NACs play important roles in diverse aspects of plant development,including pattern formation in embryos andflowers,formation of secondary walls,leaf senescence(Guo and Gan,2006;Zhong et al.,2006,2007;Mitsuda and Ohme-Takagi,2008),and lateral root development(Xie et al.,2000;He et al.,2005). Overwhelming data demonstrate that NACs are involved in responses to various biotic and abiotic stresses,including responses to a range of pathogens,drought,salt,cold,and low-oxygen stress.In Arabidopsis,three NAC members, ANAC019,ANAC055,and ANAC072,bind to the ERD1 promoter region to produce enhanced tolerance to drought stress(Tran et al.,2004).ANAC2is involved in response to plant hormones,such as ABA,1-aminocyclopropane-1-carboxylic acid,and a-naphthaleneacetic acid,salt stress, and lateral root development(He et al.,2005).ATAF1and ATAF2,along with a barley counterpart known as HvNAC6,play negative roles in response to drought stress (Delessert et al.,2005;Lu et al.,2007)and enhance pathogen resistance(Jensen et al.,2007).In addition,AtNAC102is involved in regulating seed germination under low-oxygen conditions(Christianson et al.,2009).Many NACs have been characterized in rice.SNAC1is involved in response to drought stress in guard cells and its overexpression results in significant enhanced drought tolerance at anthesis underfield conditions(Hu et al.,2006).Overexpression of the root-specific NAC transcription factor OsNAC10improves drought tolerance and grain yield in rice underfield conditions(Jeong et al.,2010).Overexpression of SNAC2/ OsNAC6,OsNAC045,and OsNAC063enhances tolerance to multiple abiotic stresses(Nakashima et al.,2007;Hu et al., 2008;Yokotani et al.,2009;Zheng et al.,2009).SINAC1and SINAM1are involved in salt response in tomato(Yang et al.,2010).Diverse expression patterns of nine NACs under various biotic and abiotic stresses were characterized in Brassica napus(Hegedus et al.,2003).For wheat,it is well documented that GRAB1and GRAB2are involved in inhibition of DNA replication of a wheat dwarf geminivirus in cultured cells(Xie et al.,1999);whereas TaNAM-B1 participates in the promotion of leaf senescence and can improve grain protein,zinc,and iron contents(Uauy et al., 2006).Recent research showed that TaNAC4and TaNAC8 are involved in both biotic and abiotic stress responses in wheat(Xia et al.,2010a,b).Collectively,many reports indicate that numerous characterized NAC members are involved in response to environmental stimuli and that different NAC members play various roles in response to abiotic stress.However,the paucity of wheat NAC members functionally characterized to date does not match the importance of this plant as a world staple crop.In this study,TaNAC2,a NAC transcription factor member from common wheat,was cloned and its expression patterns in response to water deficiency,high salinity,low temperature,and ABA were identified.Transgenic experi-ments indicated that TaNAC2increases tolerance to drought,salt,and freezing stresses in Arabidopsis.Morpho-logical assays revealed no obvious negative effects caused by TaNAC2overexpression,suggesting a potential for utilizing the gene in improving tolerance to abiotic stresses in crop plants.Materials and methodsPlant materials and abiotic stress experimentsWheat(Triticum aestivum L.)genotype‘Hanxuan10’with a prominent drought-tolerant phenotype was utilized in this study. The growing conditions and stress treatment assays for wheat seedlings have been described previously(Mao et al.,2010).To investigate the genomic origin of the target gene,16accessions of various wheat species–four A genome accessions(two Triticum urartu and two Triticum monococcum),three S genome accessions (Aegilops speltoides,the putative B genome donor),three diploid D genome accessions(Aegilops tauschii),three AB genome accessions (T.dicoccoides),and three hexaploid wheat accessions–were selected for PCR.To further identify the genomic location of the target gene,38nulli-tetrasomic(NT)lines of Chinese Spring were used for chromosome location.Arabidopsis thaliana(ecotype Columbia),chosen for transgenic studies,was grown in a controlled environment chamber at22°C, with a12/12photoperiod,light intensity of120mmol mÀ2sÀ1,and 70%relative humidity.Four T3homozygous transgenic lines were randomly selected for functional analysis and all seeds used to perform phenotypic assays,including wild-type(WT)and green fluorescent protein(GFP)controls,were same-batch-harvested.To identify the expression pattern of drought stress response genes in Arabidopsis,transgenic lines and WT planted on MS medium were treated with–0.5MPa polyethylene glycol(PEG)solution for3h. Construction and screening of a full-length cDNA library database Tissues from wheat seedlings at various growth stages and from mature plants were collected to extract total RNA with TRIZOL reagent(Invitrogen);mRNA was isolated with oligo(dT)cellulose (Qiagen).Several full-length cDNA libraries of wheat in Lambda Zap II(Stratagene)were constructed by the optimized Cap-trapper method(Mao et al.,2005).A full-length wheat cDNA library was generated with the3#end and5#sequencing data of full-length cDNA clones.A349-bp cDNA fragment encoding a NAC-like C-terminal domain was obtained by sequencing from suppression subtractive cDNA libraries of wheat treated with PEG(Pang et al., 2007)and used as a query probe to screen the full-length wheat cDNA library.Four candidate clones were obtained by blastn and the full-length cDNA of the target gene was also identified by blastn.Database searches of the nucleotide and deduced amino acid sequences were performed through NCBI/GenBank/Blast.Align-ment and similarity analysis of sequences from different species were performed by the MegAlign program in DNAStar.Signal sequence and transmembrane regions were predicted with SignalP(http://genome.cbs.dtu.dk/services/SignalP)and TMpred (/software/TMPRED_form.html).The secondary structure was predicted with PREDATOR(http:// bioweb.pasteur.fr/seqanal/protein/intro-uk.html),and the func-tional region was identified using PROSITE(http://web.expasy .org/docs/swiss-prot_guideline.html).Construction of a phylogenetic tree of TaNAC2Phylogenetic analysis was performed to understand the relation-ship between TaNAC2and NAC members from wheat and other plant species.A maximum likelihood tree based on putative amino acid sequences was constructed with the proml program in the PHYLIP software package(version3.69).The bootstrap parame-ter was set at100.2934|Mao et al.Genetic characterization of TaNAC2To analyse the structure of TaNAC2,three pairs of primers flanking the open reading frame were designed and one pair of primers specifically amplifying the A genome allele of TaNAC2was obtained (forward,5#-TGCAGAGTTCCACGATAGGCCG-3#;re-verse,5#-CCTACCGACCCAACGAACGAG-3#).The primers were further used to amplify the TaNAC2genomic sequence for gene structure analysis and chromosome identification.Subcellular localization of TaNAC2proteinThe full-length open reading frame of TaNAC2was fused upstream of the GFP gene and put under the control of the constitutive cauliflower mosaic virus 35S promoter in the pJIT163–GFP expression vector to construct a 35S::TaNAC2–GFP fusion protein.Restriction sites were added to the 5#and 3#ends of the coding region by PCR;the oligonucleotides for fusion GFP subcloning were:forward,5#-CTCT AAGCTT TCATCGG-CAGCGGAGCGATT-3#(Hin dIII site in bold);reverse,5#-CTCT GGATCC GCGGACACGGGGGGA-3#(Bam HI site in bold).The PCR product obtained was digested with the relevant restriction endonucleases,ligated with the pJIT163–GFP plas-mid,and cut with the corresponding enzyme to create a recombi-nant plasmid for expressing the fusion protein.Positive plasmids were confirmed by restriction analysis and sequenced.Recombi-nant constructs were transformed into living onion epidermal cells by biolistic bombardment with a GeneGun (Biorad Helios)according to the instruction manual (helium pressure,150–300psi).The subcellular location of TaNAC2was detected by monitoring the transient expression of GFP in onion epidermal cells as described.Quantitative real-time PCRAfter treatment with deoxyribonuclease I,RNA samples were used as templates for cDNA synthesis by the Superscript First-Strand Synthesis System kit (Invitrogen).Quantitative real-time PCR (qRT-PCR)was performed in triplicate with an ABI Prism 7900system using the SYBR Green PCR Master Mix kit (Applied Biosystems),according to the manufacturer’s instructions.Tubulin transcript was used to quantify relative transcript levels.The qRT-PCR primers were:forward,5#-ATCGGCAGCGGAGCGATT-3#;reverse,5#-AGGGGTCGAAGCGGTAGAGG-3#.Relative gene expression levels were detected using the 2ÀDD CT method (Livak and Schmittgen;2001),using the following formula:DD C T ¼ÀC T ;Target ÀC T ;Tubulin ÁTime 3ÀÀC T ;Target ÀC T ;Tublin ÁTime 0:The C T (cycle threshold)values for both target and internal control genes were means of triplicate independent PCRs.Time X is any treated time point (1,3,6,12,24,48,or 72h)and Time 0represents the untreated time (0h).Actin transcript was used to quantify the expression levels of TaNAC2and abiotic stress-response genes in transgenic Arabidopsis plants.Two transgenic lines,with the lowest and highest TaNAC2expression levels,were selected to measure expression levels of the abiotic stress response genes.The oligonucleotides for abiotic stress-response genes have been described elsewhere (Ding et al.,2009).Generation of transgenic plantsThe coding region of TaNAC2cDNA was amplified by reverse-transcription PCR using primers 5#-CTCT AAGCTT TCATCGG-CAGCGGAGCG-3#(Hin dIII site in bold)and 5#-CTCT GG-ATCC GCGGACACGGGGGGAGGCG-3#(Bam HI site in bold)and cloned into the pPZP211vector as a GFP-fused fragment driven by the CaMV 35S promoter (Hajdukiewicz et al.,1994).The transformation vectors harbouring a 35S::GFP or 35S::TaNAC2–GFP,were introduced into Agrobacterium and transferred into WT Arabidopsis plants by the floral dip transformation method (Bent,2006).Positive transgenic lines were screened on kanamycin plates and then identified by reverse-transcription PCR and fluorescence detection.Morphological characterization of transgenic plantsTransgenic plants were characterized for morphological changes under short days (12/12light/dark cycle)in a growth chamber with a constant temperature of 22°C.Root morphologies were examined on plants grown on MS medium solidified with 1.0%agar.Briefly,T3homozygous transgenic and WT seeds were germinated on MS medium and grown vertically for 8d before measurement of primary root lengths.For biomass measurement,transgenic plants and the two controls were planted in identical pots filled with vermiculite/humus (1:1)and cultured under well-watered conditions.Water loss rate determinationWater loss rates were measured using 10plants each of WT and transgenic plants (including GFP transgenic plants).Four-week-old plants were detached from roots and weighed immediately (fresh weight,FW),the plants were then left on the laboratory bench (humidity,45–50%,20–22°C)and weighed at designated time intervals (desiccated weights).The proportions of fresh weight loss were calculated relative to the initial weights.Plants were finally oven-dried for 24h at 80°C to a constant dry weight (DW).Water contents (WC)were measured according to the formula:WC (%)¼(desiccated weight –DW)/(FW –DW)3100.Cell membrane stability measurementPlant cell membrane stabilities (CMS)were determined with a conductivity meter (DDS-1,YSI),CMS (%)¼(1–initial electrical conductivity/electrical conductivity after boiling)3100.Seven-day-old seedlings (grown on 13MS medium,0.8%agar)were transferred to a horizontal screen;seedling roots were completely submerged in PEG-6000(25.4%,–1.4MPa)or NaCl (250mM).When signs of stress began to appear on WT plants,seedlings were removed and immediately thoroughly rinsed with double distilled water (ddH 2O)prior to immersion in 20ml ddH 2O at room temperature.After 2h the initial conductivities of the solutions were recorded.Samples were then boiled for 30min,cooled to room temperature and the final conductivities were measured.Determination of osmotic potentialOsmotic potential (OP)was measured with a Micro-Osmometer (model 210,Fiske Associates).Measurements were taken in the freezing point mode at room temperature.Five plants of each line were pooled as a sample,which was finely ground using a mortar and pestle before being transferred to a microcentrifuge tube.The supernatant tissue sap was obtained after centrifuging at 12000rpm for 5min at room temperature.Three replications were made for each line and the osmotic potential for each sample was measured three times.Free proline was extracted and quantified from fresh tissues of well-watered seedlings (0.5g)as described by Hu et al.(1992).Chlorophyll fluorescence assaysChlorophyll fluorescence was measured with a portable chloro-phyll fluorescence meter (OS 30P,Opti-sciences)after applying stress treatment of 350mM NaCl for 24h.Fully expanded leaves of stressed plants were selected to determine the chlorophyll fluorescence parameters;three measurements were made for each plant and 20plants were used for WT and transgenic samples.The maximum efficiency of photosystem II photochemistry,F v /F mTaNAC2confers multiple abiotic stress tolerances |2935¼(F m–F0)/F m,was determined to assess changes in the primary photochemical reactions determining photosynthetic potential at an early stage of salinity stress.Abiotic stress tolerance assaysDrought tolerance assays were performed on seedlings.Both WT and transgenic seeds were grown on MS medium.Seven-day-old seedlings were planted in sieve-like rectangular plates(3cm deep)filled with soil mixture and well watered.Seedlings were cultured in a greenhouse(22°C,70%relative humidity,120l mol mÀ2sÀ1,12/ 12light/dark cycle)without watering.For salt tolerance assays,seedlings were planted in sieve-like plates and well watered as described for the drought tolerance treatment.Water was withheld for2weeks before irrigation with NaCl solution(250mM)from the bottoms of the plates.When the soil was completely saturated with salt water,the NaCl solution was removed and the plants were cultured normally.For cold tolerance assays,four seedlings were planted in identical pots and cultured as described above.Seedlings at4weeks were stressed in a–10°C freezer for1.5h and then cultured at 15°C for24h to facilitate recovery before culturing under normal growing conditions.ResultsMolecular characterization of TaNAC2A full-length cDNA of the target gene was obtained by screening full-length wheat cDNA libraries.Blast results showed it was highly homologous to SNAC1and almost identical to TaNAC2(AAU08786)in the5#and3#un-translated regions and the open reading frame(Xue,2005). It was therefore considered to be TaNAC2and named accordingly.The TaNAC2cDNA is1559bp in length and consists of203bp of5#untranslated region,990bp of open reading frame,and366bp of the3#untranslated region.The open reading frame encodes a polypeptide of 329amino acid residues with a predicted molecular mass of36.75kD and pI value of6.55.The deduced amino acid sequence shows relatively high homologies with counterpart monocot NAC family members,viz.those of Oryza sativa and Zea mays,and lower homologies with other NAC family members from dicot species,such as Glycine max and A.thaliana.TaNAC2has74.8% identity to OsNAC1(ABD52007),74.7%to ZmNAC1 (NP_001123932),60.1%to OsNAC3(NP_001059213), 57.1%to TaGRAB1(CAA09371),and very low identity with NACs from dicot species,including ANAC102and ATAF2.Scansite analysis indicated that TaNAC2has characteristic N-terminal and C-terminal regions.The N-terminal region contains a NAC domain(19–172amino acid residues),which is highly conserved across both monocots and dicots, and functions as a DNA-binding domain(Fig.1A).The C-terminal transcription activation region is extraordinarily divergent and is thought to be involved in regulation of downstream gene expression under different environmental stimuli.Secondary structure prediction revealed that the TaNAC2sequence forms seven a-helixes and four b-pleated sheets.Phylogenetic analysisA phylogenetic tree was constructed with the putative amino acid sequences of TaNAC2and some NAC family members from other species.TaNAC2clustered in the same clade as OsNAC1/SNAC1and ZmNAC1(Fig.1B);SNAC1 had earlier been shown to enhance tolerance to drought and salt stress in transgenic rice(Hu et al.,2006).Genetic characterization of TaNAC2The genomic sequence of TaNAC2was amplified with genome-specific primer pairs as described in materials and methods.The genomic sequence of TaNAC2was about1.4 kb,consisting of two exons and one intron,with all splicing sites complying with the GT-AG rule.To investigate the genomic origin of TaNAC2,16accessions of various wheat species were subjected to PCR.As shown in Fig.2A,the target fragment was amplified by all accessions carrying the A genome,indicating that TaNAC2originated from the A genome.This result was confirmed by PCR results for38 nulli-tetrasomic Chinese Spring wheat lines(Fig.2B).TaNAC2 was amplified in all lines except NT5A5B and NT5A5D, indicating that TaNAC2was located on chromosome5A. Early response of TaNAC2to hyperosmotic stresses Diverse expression levels of TaNAC2were characterized by qRT-PCR of seedling leaves.Different expression patterns were observed under water deficiency,salt,low temperature (LT),and ABA treatment(Fig.3).TaNAC2was significantly activated by salt,LT,and water-deficit stresses,but relatively weakly by ABA.Among the four stresses,TaNAC2was extremely sensitive to NaCl and LT stresses at the early stage of treatment.The expression patterns and maximum expres-sion levels differed for each stress.The expression levels peaked at3h for NaCl,12h for ABA,24h for PEG,and 72h for cold,with the corresponding maxima being116,9, 29,and160greater,respectively,than the control. Subcelluar localization of TaNAC2Transcription factors are typically localized in cell nuclei where they perform DNA binding and transcriptional activation roles.However,the TaNAC2polypeptide se-quence had no signal peptide and transmembrane region, suggesting that it might not interact with the cell membrane. To identify the cellular localization of TaNAC2,the expression and distribution of TaNAC2were examined in both transgenic Arabidopsis roots and onion epidermal cells by expression of the fusion protein with GFP using fluorescence microscopy.As Fig.4A shows,TaNAC2–GFP was highly expressed in transgenic Arabidopsis roots, especially in young root tips,and the well-organized distribution pattern suggested that TaNAC2might localize in the nucleus.To further identify the subcelluar localiza-tion,TaNAC2–GFP was transiently expressed in onion epidermis,and microscopy showed that TaNAC2was localized in nuclei(Fig.4B).2936|Mao et al.Fig.1.Sequence alignment of TaNAC2and NACs in various plant species.(A)Amino acid alignment of TaNAC2and other NAC family members from selected plant species.Gaps (dashed lines)were introduced for optimal alignment.The numbers on the left indicate amino acid positions.Identical amino acid residues are shaded black.The region underlined indicates the conserved NAC-domain.Alignments were performed using MegAlign of DNAStar.(B)Phylogenetic tree of TaNAC2and NAC members from other plant species.TaNAC2confers multiple abiotic stress tolerances |2937Morphological characteristics of TaNAC2-overexpressing Arabidopsis plantsThe phenotypes of transgenic Arabidopsis plants with TaNAC2were assessed at different developmental stages.The expression levels of TaNAC2in four T3homozygous lines were measured prior to phenotypic assays(Supplementary Fig.S1,available at JXB online).Primary roots of TaNAC2 transgenic lines were longer than the WT and GFP controls, and in three of the four lines the differences were significant (F-test,*P<0.05;Fig.5).There was no difference between the transgenic lines and WT control for germination rate, lateral root number,and seedling size.For seedlings(4weeks old)grown in soil,there was no obvious difference between transgenic and WT plants under well-watered conditions, except that theflowering date of TaNAC2transgenic lines was3–5days earlier than WT(data not shown).Thefinal biomass per plant of TaNAC2transgenic lines was higher than the WT control,but the differences were not significant (Supplementary Fig.S2).TaNAC2transgenic lines have improved physiological traits for abiotic stressTo assess water retention ability of transgenic Arabidopsis plants,the four transgenic lines,along with WT and GFP controls were subjected to a detached-rosette rate of water loss assay.Fresh weights were recorded seven times over a5.5h period.The four transgenic lines showed lower rates of water loss at each time point(Fig.6A).Thefinal relative water contents of TaNAC2rosettes were significantly higher than those of the WT and GFP controls(F-test,**P<0.01; Fig.6B).The four transgenic lines grown under well-watered conditions were tested for osmotic potential(OP).The OP of three of the transgenic lines were significantly lower than those of WT and GFP(F-test,*P<0.05,**P<0.01);the difference between WT and GFP transgenic lines was not significant.Thus overexpression of TaNAC2,but not GFP alone,appeared to reduce OP(Fig.7A).To probe the reason for OP reduction in transgenic plants,free proline contents were determined.In this series of experiments there was no difference between TaNAC2transgenic lines and controls in terms of free proline content(data not shown). Chlorophyllfluorescence is an effective parameter for revealing early signs of stress and is a suitable way to screen for stress tolerance in plants(Chaerle et al.,2007).To further evaluate photosynthetic potential,the four trans-genic lines were subjected to a chlorophyllfluorescence assay.Under normal conditions,F v/F m ratios for the transgenic lines were similar to the controls(data not shown).Under severe salt stress conditions,F v/F m ratios for all TaNAC2transgenic lines were significantly higher than the controls(F-test,**P<0.01;Fig.7B).To examine the response of TaNAC2transgenic lines against hyperosmotic stress,the lines were subjected to physiological assays of drought and salt stresses.After germination on MS medium,7-day-old seedlings were treated separately with25.4%(–1.4MPa)PEG-6000and NaCl(250mM).Twenty hours later,when signs of PEG stress began to appear on WT and GFP plants,samples were collected for CMS measurements.The CMS of transgenic lines were significantly higher than the controls(F-test,*P< 0.05;Fig.7C),indicating that PEG stress damage on WT plants was more severe than on TaNAC2plants.For salt stress,symptoms appeared on control plants4h after NaCl treatment,but no symptoms were identified on TaNAC2 transgenic lines.CMS determinations revealed that the CMS for most TaNAC2plants was higher than that of WT and GFP,and the CMS of three transgenic lines reached significant levels(F-test,*P<0.05,**P<0.01;Fig.7C). TaNAC2transgenic lines have pronounced tolerance to multi-abiotic stressesTo characterize the performance of TaNAC2transgenic lines under drought stress in soil,the four lines were tested at the seedling stage.After a30-day water-withholding period,the rosette leaves of WT and GFP plants became dark,whereas the TaNAC2transgenic lines remained green. On the35th day,all WT and GFP plants displayed severe wilting(all rosette leaves were severely curled and some were dead),whereas only some of the TaNAC2transgenic lines showed signs of severe water stress and the rosette leaves of some transgenic plants were still green and fully expanded.Three days after rewatering,all WT and GFP plants were dead,whereas30–60%of TaNAC2transgenic lines survived the stress(Fig.8A,D).To determine whether TaNAC2overexpression enhances tolerance to salt stress,Arabidopsis seedlings grown in soil were exposed to250mM NaCl solution.About20h later, the leaf tips of control plants began to crimple,but no signs of salt stress were observed on the transgenic lines.Three days later,the rosette leaves of WT began to bleach,and again there no signs of salt stress on the transgenic lines. Seven days later,it was evident that most transgenic plants were much greener than the control plants.Fifteen days after stress(withholding water),more than90%of WT and GFP plants were dead,whereas37–53%of transgenic plants were still alive(Fig.8B,D).To examine response to cold stress,plants of the same lines were put into a freezer and subjected to freezing tress. Only18–22%WT and GFP rosette leaves survived the severe cold stress,whereas the survival rates of rosette leaves on TaNAC2transgenic lines reached32–71%,and the survival rates of transgenic plants(79–85%)were also much higher than WT(56%)and GFP(67%;Fig.8C,D).At,Arabidopsis thaliana;Bn,Brassica napus;Ec,Eleusine coracana;Eg,Elaeis guineensis;Gh,Gossypium hirsutum;Gm,Glycine max; Hv,Hordeum vulgare;Os,Oryza sativa;Ph,Petunia hybrida;Sl,Solanum lycopersicum;Ta,Triticum aestivum;Zm,Zea mays.The tree was constructed with the PHYLIP3.69package.Bootstrap values are in percentages.2938|Mao et al.。